Zingiber officinale (ginger): 122006057
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Entry
122006057 CDS
T08725
Name
(RefSeq) probable galacturonosyltransferase 6 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00520
Amino sugar and nucleotide sugar metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
122006057
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
zof01003
]
122006057
Enzymes [BR:
zof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
122006057
Glycosyltransferases [BR:
zof01003
]
Polysaccharide
Structural polysaccharide
122006057
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
DUF5600
DUF2985
Motif
Other DBs
NCBI-GeneID:
122006057
NCBI-ProteinID:
XP_042417319
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Position
7B:77208691..77213642
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AA seq
602 aa
AA seq
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MVALRRPWRKVVIYAFLVVSFIAPLVLFFSVPAADNSPFHEKKNFLNISSGILNSFSPGR
TSNAMQLNSMEQEVSEDPQLKGVIYKDDNLKNVQIKYNQNVTISGATNGNSSSRLSGNGD
NQPYHVPNSAGGEVILHGILDKKQESSDKKTGVLTIRKSPSRPSTAKIWEMEDQLVMAKA
YVHFSSSNTNFHLLRELKLRIKEIDRVLSRSNKDADLFTSDLQKMKNMEATLSKARKSHP
ECSAMASKLRAQLFNAEEQLRAQQNQASYLVRLTGRTFPRGFHCLSMRLTTEYFALHPDL
RKLPNSHNFDNPDLYHYAIFSDNVLACLVVVKSTVNSSLEPEKIVFHVVTDSFNFPAMLM
WFLLNPPGKATIQIQSLDDFVFLPTGFNSMFRQSAKADPRYASPLNHLRFYLPEVFPSLN
KILLLDHDTVVQKDLRELWNLDMKGNVNGAVEMCKDNVTSQKLEMLVNVANPAFANSFDG
KACLWAFGMNIFDLQEWRTRGLAATYHKWNEIGSKHLWNAGSLPLGQLLFYNHTMTLDRR
WHVFGLGSDLRVGVTEIEKAAVIHYDGNMKPWLDTAITKYRGYWTRFLDYSNPYFRQCNI
HG
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgctccgccggccatggcgtaaggtcgtcatctacgccttccttgtcgtctcg
ttcatcgccccgcttgtcctcttcttcagcgtccccgccgccgataactcccccttccat
gaaaagaagaactttctcaatatcagctctggtatcctgaatagtttctcccccgggcgt
acttctaatgctatgcaactcaattcgatggagcaggaagttagtgaggacccgcagctg
aaaggagttatctataaagatgataatttgaagaatgttcagattaaatacaatcaaaat
gttacaatttctggagcaaccaacggcaactccagctcaaggcttagtgggaatggagac
aatcaaccttatcacgtaccaaattctgctggtggagaggtcattttacatggaatactt
gataagaagcaggaatcttctgacaaaaaaactggtgttttgaccattcgaaagtccccc
tctagaccatcaactgccaaaatatgggaaatggaggaccagttagtaatggcaaaggct
tacgtgcacttttcttcttcaaatactaactttcacttgttacgagagttaaagcttagg
attaaagagatagatagggttcttagccgttccaacaaagatgcagatttatttacaagt
gacttgcagaaaatgaaaaacatggaagcaactttgtcaaaagccagaaaatctcatccg
gagtgctccgcaatggcatcaaaattacgtgcccaattattcaatgctgaagaacaactc
agggctcaacagaaccaagcttcatatcttgttcgtcttactggcaggaccttcccaagg
ggttttcactgcctatctatgcgtctcactactgaatatttcgcattgcaccccgatttg
cgaaaattgcccaacagtcataattttgataatccagatctttatcattatgctattttc
tctgataatgtgctggcatgtttggtggttgtgaagtcaacagtaaattcatcactggag
cctgagaaaattgtctttcatgtggtaactgattccttcaattttccagcaatgctaatg
tggtttttgttgaatccacctggaaaggcaactattcagatacagagtttggatgatttt
gtattcttacctactggctttaattcaatgttcaggcagtcagctaaagctgatccaaga
tatgcttctccactcaatcaccttcgattttacttaccagaggtcttcccctcccttaat
aagattttgcttttggaccacgatacagtggtgcagaaagatttacgagaactgtggaat
ttagatatgaaaggtaatgtaaatggagcagtggaaatgtgcaaggacaatgtaacatca
cagaaattggaaatgcttgtgaatgttgcaaatccagcattcgctaatagttttgatggc
aaggcatgtttatgggcatttggcatgaatatatttgacctgcaggagtggagaacacga
ggtctggctgcaacttatcataaatggaatgaaattgggagtaagcatctgtggaatgca
ggaagtcttccactgggtcagttgcttttctacaaccacactatgaccttggacagacgg
tggcatgtttttgggctcggttctgatttgagagttggagtgacagagattgagaaggca
gcagtgatccattacgacggaaacatgaaaccatggttagatactgccattacaaaatat
agaggttactggaccagattccttgactatagcaatccttacttccgacaatgcaacatc
catggataa
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