Zingiber officinale (ginger): 122006143
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Entry
122006143 CDS
T08725
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122006143
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zof01006
]
122006143
Enzymes [BR:
zof01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122006143
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122006143
2.5.1.29 geranylgeranyl diphosphate synthase
122006143
Prenyltransferases [BR:
zof01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122006143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
122006143
NCBI-ProteinID:
XP_042417449
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All DBs
Position
7B:complement(82684793..82692732)
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AA seq
374 aa
AA seq
DB search
MASLMMLPSGCCNAALSRVYLSAAAFRPAPSALGFGSQIATSAVHLSRRGAPPPPRVMEV
ETSLAPPDTVLSTGFDFKGYMLEKAAAINCALDAAAPLAHPERIHEAMRYSLLAGGKRVR
PVLCLAACEVVGGGSAWAMPAAVSVEMIHTMSLIHDDLPCMDDDDLRRGRPSCHRAFDEA
TAVLAGDALLALAFGHLANPASYPADGSVPPDRIVRAVGELSRCVGAEGLVAGQVADLEA
TGVGTPVTLDHLEFIHLHKTAALLEASVVLGAILGGASDDQIDKLRKYAKSIGLLFQVVD
DILDVTKSSEELGKTAGKDLASDKTTYPKLLGLEKSKEFADRLLKDSREQLAGFDPIKTA
PLLQLANYIAYRDK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgatgatgcttccttctggctgctgcaacgctgcgctttccagggtttac
ctctccgccgctgccttccgccctgcgccgtcggcactgggcttcggcagccaaatagca
acctcggccgtccacctcagccgtcgcggcgccccgccgccgccccgggttatggaggtc
gagacctccctcgcgccgcctgacacggtcctctcgacgggcttcgattttaagggttac
atgctcgagaaggccgccgccatcaactgcgccctcgatgcggccgcgccgctcgcgcac
ccagagcggatccatgaggcgatgcgctactcgctcctcgccggtggcaagcgcgtgcgc
cccgtgctgtgcctggccgcctgcgaggtcgtcggtggtgggagcgcctgggcgatgccg
gctgccgtctccgtggagatgatccacaccatgtcgctcatccacgacgacctcccctgt
atggatgacgacgacctccgccgcggccgcccttcttgccaccgcgcctttgacgaggcc
acagccgtcctcgctggcgacgccctcctcgcgctcgccttcggccacctggccaatcct
gcgtcgtaccctgccgacggatctgtgcccccggaccggatcgtgcgtgccgtgggcgag
ctctctcgctgcgttggcgccgagggcctcgtcgcgggccaggtggccgacctcgaggcc
actggcgtcggaactcccgtcactctcgaccatctcgaattcatccacctccacaaaacc
gctgctcttttggaagcttcagttgtcctcggcgccattttgggcggcgcctccgacgac
cagattgacaagctgaggaagtatgccaagtccatcggcctactgttccaggtagtcgac
gacatcctcgacgtgaccaagtcatcggaggagctggggaagacggcagggaaggatctg
gccagtgataaaacaacctacccaaagctattgggactggaaaaatcaaaggaattcgcc
gacaggctactgaaagattccagggagcagctcgccggttttgatccaataaagacggca
cctttgctacaactagcaaattacatcgcctaccgcgacaagtag
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