KEGG   Zingiber officinale (ginger): 122006362
Entry
122006362         CDS       T08725                                 
Name
(RefSeq) WD repeat-containing protein 48 homolog
  KO
K15361  WD repeat-containing protein 48
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    122006362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122006362
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     122006362
SSDB
Motif
Pfam: WD40 WD40_Prp19 DUF3337 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_EML Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_SCAP WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_WDR75_2nd Beta-prop_DCAF4 WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_DCAF12 Beta-prop_IP5PC_F RAWUL WD40_RFWD3 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 122006362
NCBI-ProteinID: XP_042417769
LinkDB
Position
7B:94923158..94930834
AA seq 758 aa
MHRVGSAGNTSNSSRPRKEKRLTYVLNDADSTKHCAGINCLAVLKSTTPCDYLFTGSRDG
TLKRWALSKNDVTYSATFESHVDWVNDAVMAGSNLVSCSSDTTLKIWNPLSDGVCTRTLR
QHSDYVICLAAAEQNGNIVASAGLGGEVFIWDIDSALLPVAKSVDSKEDEHSNGNAGPPM
SSLRGINVGNDISFHNNQSSGYCPIAAKGHKESVYALAMNDSGTLLVSGGTEKVIRVWDS
RSGSKVLKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVHSYAVHTDSVWA
LASNPAFTHVYSGGRDQSLYLTDLSTRESLLLYTKEEHPILQMVLQDDSIWIATTDSSVH
RLPAEGQNPQKVLERGGSFLAGNLSFTRARASLEGSAPVPVYKEPSFTISGIPGIVKYEI
LNNRRHVLTKDTVGSVKLWEITKGVVIEDYGKVSFDEKKEELFEMVSIPAWFTMDTRLGS
LSVHLDTPQCFSAEMYAVDLNMVGAPEDLKINLAQETLRGLLVHWMAKRRHRSGSHTSSN
GDVASTHDIVRNHPHSKIEVDDGSDNSNFSALPSFEFSTVSPPSIVTEGSHGGPWRKKIT
DLDGTEDEKDLPWWCMECVLNSRLPARENTKCSFHLQACEGSNVQIITQGKLSAPRILRI
NKVINYVLEKMVLDKPLDGGSSDGSSGLGLSTGQSQLSSLGDVSLRSGMKAWQKIKPSIE
ILCNNQVLLPEMSLATVRAYIWKKPEDLILNYRVVQNK
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgcaccgtgtgggcagtgcaggtaacacctccaattcatcacgtcctcggaaggagaaa
cgcttgacatatgtactgaatgatgcagatagcacaaagcattgtgcaggtattaattgt
ttggctgtcctaaaatccacaactccttgtgattatcttttcacggggagcagagatggg
acattgaaaagatgggctttaagcaaaaatgatgttacctattcggctacatttgagtcc
catgttgattgggtcaatgatgcagttatggctggtagcaaccttgtctcatgttcttca
gacactaccctgaagatatggaaccccttgtctgatggtgtttgcacaagaactcttcgt
caacattctgactatgtcatttgtcttgctgctgctgagcaaaatggcaatatagttgcc
tctgcggggcttggtggggaggttttcatttgggacattgattcagctctccttccagtt
gcaaaatctgttgattcaaaagaagatgaacattctaatgggaatgcgggacctccaatg
tcaagcctacggggtattaatgtgggaaacgacatatcttttcataacaatcagtctagt
ggatattgtccaattgctgccaaaggccataaggagtcagtttatgccttagcaatgaat
gatagtgggaccttgcttgtttctggtggaactgagaaggttatacgggtttgggactca
agatctggttcaaaagttttgaagcttagagggcatactgacaacatcagggctttgctt
ctcgattccacaggaaggttctgcctatcagggtcatctgattcaatgatccgtctatgg
gatcttggtcagcaacgatgtgtgcattcttatgctgtccataccgattctgtatgggct
ctcgccagtaatccagcattcacgcatgtttatagtggtgggagagaccaatctttgtac
ctgacagacttgtctaccagagaaagccttttgctttacacaaaagaagaacaccctatt
ttacagatggtgttacaagatgatagtatatggattgcgactacagattcatctgtacat
aggttgccagctgaaggacagaatccacaaaaagttcttgaaagaggtggttctttttta
gcaggaaatttgtctttcacaagggcaagagcttctttagaaggatcagcccctgtacct
gtatacaaagaaccatctttcaccatttctggaatcccaggaattgtaaaatatgaaatc
ttgaacaacagaagacatgtgttgaccaaggatacagtaggttctgttaaattgtgggag
attaccaagggtgttgtgatcgaggactatggcaaggtgtcttttgacgaaaagaaggaa
gagctatttgaaatggtgagtatacctgcatggtttacaatggatacgcgacttggaagt
ttgtctgtccatttggatactcctcaatgcttttctgctgagatgtatgccgtggacttg
aatatggtaggagcaccagaggatctcaagataaacctagctcaagagacacttcgtggt
ttgttggtccactggatggctaaaagaaggcatagatctgggtcacacacttcatcaaat
ggagatgttgcatctacacatgatattgttagaaatcatccacactcgaaaattgaggtg
gatgatggttcagacaacagcaatttctctgccctcccttcttttgaattttcaacagtt
tcacctccatcgatagttacagagggttcacatggaggtccttggagaaagaagatcacg
gatttagatggaacagaagatgagaaggatcttccttggtggtgtatggaatgtgtttta
aatagccgattacctgcaagagaaaacacaaaatgtagctttcatttgcaagcttgtgaa
ggttcaaatgtgcaaataataacacaaggcaaattgagtgcgcctcggatattgaggatt
aacaaagtaataaactatgtcttggaaaagatggttcttgacaaaccattggatggtgga
agctccgatgggtcatctggtttgggattgagcacaggacagtctcaactttcttcacta
ggagatgtctcactacgatcagggatgaaggcctggcaaaagataaagccaagcatcgaa
atcttatgcaacaaccaggtgctcttacctgaaatgagtttggccacagttcgagcgtat
atatggaagaagccagaagacttgatcttgaactacagagtggtgcagaacaaatag

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