Zingiber officinale (ginger): 122006444
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Entry
122006444 CDS
T08725
Name
(RefSeq) heat stress transcription factor A-1-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122006444
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122006444
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
HAUS-augmin3
Mei5
TMF_TATA_bd
DUF3450
DUF6212
Motif
Other DBs
NCBI-GeneID:
122006444
NCBI-ProteinID:
XP_042417882
LinkDB
All DBs
Position
7B:complement(98089264..98095686)
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AA seq
506 aa
AA seq
DB search
MMPMDGSGGDGVSTPTSEVTTTTANHGLSGGSPPPFLSKTYEMVDDPATDAVVSWGPANN
SFVVWNTAEFARVLLPKLFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLK
TISRRKSSQSHNQQQQPQTQNTIEVGKFGLEEEIERLKRDKNVLMQELVRLRQQQQSTDQ
QLNTLGQHLQGMEHRQQQMMSFLAKAMQSPGFLAQFVSQNDNNRRIVGVNKKRRLPRQGK
LDGQSDVKDGQIVKYQPLINAAAKAMVMQILKFDKSPRSESFGNNPNYLIENFSSPPEGF
NSRSSVKRITGVTLSEVPGVTLSEAPTNSCDSSLPTTSGYPATSSLAMPSDIHSSNAANT
VTAAPSMNLSQGQAMMPNGFNQSHAGLNGGSVPMNPIPDFMNELLEIETDKFASDADVDI
LDDAEKLPSINDPFWEQFFAGSPLVGDAEEVDSSMHEPGDARIESGDKWDGTHNMAYLTE
QMGNLASHTQLMPEIAHQNLAFSSTD
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccatggatggctccggaggcgacggcgtcagtactcctacgtcggaagtgaca
acgacgacggcgaaccatggacttagcggtggctctcctcctccgttccttagcaagaca
tacgagatggtggatgacccggcgacggatgcggttgtgtcgtgggggccggccaacaac
agctttgtagtgtggaatacagcagagttcgccagggttcttctccccaagttgttcaag
cataataacttctccagcttcgtccgtcagcttaatacctatggtttcagaaaagttgat
cctgatcgatgggagtttgccaatgaaggtttcttgagagggcaaaagcatttgttgaaa
acaattagtaggagaaaatcaagtcagtcacataaccaacaacagcagccacaaacacag
aacactattgaggtggggaaatttggtttggaggaagagatagaaaggctcaagagagac
aagaatgtcctcatgcaggaactggtcaggctgaggcaacaacagcaaagtactgatcag
caactaaacaccttgggccagcacctccaaggcatggaacatcgccagcaacaaatgatg
tcattcttggcaaaggccatgcaaagccctggtttcttagcccagtttgtgtcacaaaat
gacaacaatcgacgcattgttggagtaaacaagaagcggagattgcctaggcaaggcaag
ctggacggccaaagcgatgtgaaggatggccagatagttaaataccagcccttgataaat
gcagcagcaaaagcaatggtgatgcagattctaaaatttgacaagtcacctaggtcggaa
tcttttggcaataacccgaactacttaattgagaatttttcatctcctcctgaaggtttt
aatagcagaagttcggtaaagcgaataactggagttactctgtctgaagtccctggagtt
actctgtctgaagcccctacaaattcatgtgattcatctttgcccacgacctctgggtat
ccagcaacatcctcattagccatgccatctgatattcattcttctaatgcagcaaatact
gtgacggcggcgcctagtatgaatctttctcaaggccaggccatgatgccaaatggattc
aatcagagccatgcaggactgaacggtggaagcgttcctatgaatcctattccagacttc
atgaatgagttgctagaaatcgagaccgataagtttgcttctgatgctgatgtggatata
ctagacgatgccgagaagcttccaagcatcaatgatcctttctgggagcagttctttgca
ggcagcccactcgtgggagatgctgaagaggttgattcgagcatgcatgaacctggcgat
gcaagaatagaatcaggggacaagtgggacggcactcataacatggcttacctcacagag
cagatggggaatcttgcctcacatacacagttaatgcctgagatcgcccaccagaatctg
gctttctcgagtacagactaa
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