Zingiber officinale (ginger): 122006568
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Entry
122006568 CDS
T08725
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 1B-like
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00270
Cysteine and methionine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
122006568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122006568
03032 DNA replication proteins [BR:
zof03032
]
122006568
03036 Chromosome and associated proteins [BR:
zof03036
]
122006568
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
zof02048
]
122006568
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
122006568
Transcription factors [BR:
zof03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
122006568
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
122006568
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122006568
Prokaryotic defense system [BR:
zof02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
122006568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNMT1-RFD
DNA_methylase
BAH
Motif
Other DBs
NCBI-GeneID:
122006568
NCBI-ProteinID:
XP_042418055
LinkDB
All DBs
Position
7B:complement(101771778..101783163)
Genome browser
AA seq
1532 aa
AA seq
DB search
MARNPGGSNSTGMTRSGKRRSSKRKVTDNAESATAVECGKHSSNLENDNEIDACKRPRRA
AACSNFKERSVRISDKSSVLETKKIQVEENEEVAVELTRLGAEDLPPCRKLVDFTIHDAD
GNAQPFEMSEIDDCFITALVLPSDDNLGKERDRGIKCEGFGRIECWSISGYDEGSPVIWV
STEIADYECAKPAGSYKKFYDLFYEKACICVHVYQKLAKTVSGNSTLSLEELLASVIRSM
SGTKNFPAGSNCRDFVISLGEFIYNQLIGLDESSTNNNVNWATMPTLIALRDECGSRSES
KNFPLRVSNQNLRIKEGEVLGSTEDEDEKLARLLQEEENWKAMRQQKSHRAATNTKKNIY
IKINEIEIANDYPLPAYYRPSNHEMDEYLFFESENNMSYSDLPRRILDNWALYNSDSRLI
SLELLPMKSCAEIDVTIFGSGQMREDDGSGFELDNDLGLSSSSHSNHADIEGVPIYLSAI
KEWMIEFGASMIFISIRTDVAWYRLGKPAKQYDPWHQPVLKTAKLAISIITLLKEQSRVS
KLSFADVIKKVSEFSKTHPAYISSNLSLVERYIVVHGQIILQQFAEYPDETIRKCAFIIG
LSENMEQRSHTKLIMKKKALLKKEENLNPCAAMGPTLSSRKVMRATTTRFINKIWGDYYL
NFFPEDSTNGDAHEPVEIEGELEDNEDDEVEEENALVLDQQPTKPHSTSHSSKLHKEIQW
EGKPNGKMNSGETLYRCAIVRGHVIEIGGAVTMEADVNDEPSLLFVEYMFEKHNGVKMAH
GRVLLKGSQTILGNAADERELFLSNDCMEVELGNIKESIVVDIRLRPWGHQYRKDYANAD
KIDRAKAEENRRKGLPMEFYCKVLYNPERGGFFVLPHHSMGLGNGVCGSCKEKSLQKDDF
KLSSNSSFVYKRIEYTVQDFLYVRPQFFDSEEQEDLGTFKSGRNVGLKAYVVCQILEIPV
SKQHTLKSAKVKVRRFYRPEDISSEKAYSSDIREVYYSENVVSVPVDMIEGKCEVRKKID
VLSFGIPVLDDIFFCEYCYDPVKGTLKQLPANIKVSSLKIKEDQIAYRKKKGKEKCGDEF
SEKLTDVSRENHLATLDIFAGCGGLSAGLQHSGVSYTKWAIEYEEPAGEAFRYNHPEALM
FVDNCNVILRAIMEKYGDSDDCISTSEAADLAASLDEEKLKNLPKPGEVDFINGGPPCQG
FSGMNRFNRSTWSKVQCEMILAFLSFAEYFRPKFFLLENVRNFVSFNKGQTFRLTLASLL
AMGYQVRFGILEAGAYGVSQSRKRAFIWAASPEETLPEWPEPIHVFATPELKISMPGNGY
YTAVRSTAGGAPFRSITVRDTIGDLPPVANGAAKPTIDYGSEPISWFQKNIRSGMSALND
HISKEMNELNLIRCQRIPKRPGADWRDLPDEKVKLSTGQMVDLIPWCLPNTAKRHNQWKG
LFGRLDWDGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFSGNVQNK
HRQIGNAVPPPLAYALGRKLKEAVEGKQSPSA
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaaatcctggaggttcgaattctacaggaatgacaaggagtggcaaacgaagg
tcatcgaaaaggaaagtaactgataatgctgaatctgctactgcagtggagtgtggaaaa
catagtagcaatcttgaaaatgataacgaaatagatgcttgcaagaggccaaggcgagct
gcagcatgctcaaactttaaagagagaagtgtcagaatatctgacaaatcctcagttctt
gaaacaaagaaaatacaagtggaggagaatgaggaagtggctgttgaactgactagactt
ggtgcagaagatctccccccatgtagaaagcttgttgatttcaccattcatgatgctgat
ggaaatgcacagccatttgaaatgtcagaaatagatgattgtttcatcactgcactcgtt
ctgccttcggatgacaatctgggaaaagagagagacaggggaataaaatgtgaaggattt
ggccggatagagtgttggtcaatttcaggttatgatgaaggttcaccagttatttgggtc
tcaacagaaattgcagactatgagtgtgcaaagccagcaggcagttacaagaagttttat
gaccttttttatgagaaggcatgcatatgcgttcatgtttatcaaaagttggctaaaact
gttagtgggaactcaactttgagccttgaggagttgcttgcttcagtaatccgttctatg
agtggaaccaagaattttcctgctggatcaaattgtagagattttgtgatctctcttgga
gagtttatttacaaccagctaataggcctagatgagtcttctaccaacaacaatgttaat
tgggcaactatgccaactcttattgctttaagagatgaatgtggaagtaggtcagaatca
aagaattttccattaagggtatcaaatcagaacttgaggattaaggaaggagaagtttta
ggttctactgaagatgaagatgagaaattggcaagacttttgcaggaagaggaaaattgg
aaggctatgaggcagcaaaaaagccatagagcagctacaaacactaaaaagaacatctac
ataaaaatcaatgagatagagattgctaatgattatccattgcctgcctattaccgacct
tccaaccatgaaatggatgaatacttattttttgagagtgagaacaatatgtcatattct
gatcttcctagaaggattcttgacaattgggctctctataattctgactcgaggctaatt
tctctggagcttctgccaatgaagtcatgtgcagaaattgatgtgactatttttggatct
ggtcaaatgagagaggatgatggtagtggatttgaattggataatgacctaggtctttct
tcttcaagccattctaaccatgcagatattgaaggggttccaatctatcttagtgctatt
aaggagtggatgattgaatttggtgcttcaatgattttcatctctatccgaacagacgtt
gcctggtacaggttagggaaacctgcaaaacaatatgatccttggcatcaaccagtcctg
aaaacagccaagcttgctatttctataatcactttgttaaaagaacaaagcagggtttca
aaactttcctttgctgatgtaattaagaaagtgtcagaatttagcaaaactcatcctgca
tatatatcatccaacttatctttggttgagagatacattgttgtacacggacagattatt
cttcagcagtttgctgagtatcctgatgaaacaattaggaagtgtgctttcataattgga
ctttctgagaatatggagcaaagaagccatacaaaactcataatgaagaaaaaagctctg
ttaaagaaggaagaaaacttgaatccttgtgcagcaatgggacctactttatccagcaga
aaagtaatgcgtgctacaacaacaagatttatcaataaaatttggggagactactacttg
aattttttccctgaggactctactaatggggatgcacatgagcctgtagaaattgaagga
gagctggaggacaatgaagatgatgaagtagaagaggagaatgcattggtgttggatcaa
caacccacaaagcctcattcaacctcacactcttctaagcttcataaggaaatccaatgg
gagggaaaacctaatgggaaaatgaattctggggagactctttatcgttgtgcgattgtc
cgtggacatgttatagaaattggtggagcagtaactatggaagctgatgtaaatgatgag
ccatctttgttgtttgtggaatacatgtttgagaaacataatggtgtcaaaatggctcat
ggaagggtgttgctcaaaggctcccagactatccttggaaatgcagctgatgagagagag
ttgttcctttcaaatgactgtatggaagttgaactagggaatattaaagaatccatagta
gttgatatccgtttacggccctggggacaccagtacagaaaggattatgccaatgctgat
aagatcgatagagcaaaagcagaggagaatagacggaaaggactgcctatggagttctat
tgcaaagtcttatataaccctgagaggggtggtttttttgttcttcctcatcacagtatg
ggccttggaaatggtgtttgtggctcttgcaaagaaaagtccttgcagaaagatgatttc
aaattgagttccaattctagctttgtctataagaggattgagtacactgttcaagatttt
ctttatgtcagacctcagttctttgacagtgaagaacaggaggatcttgggacttttaaa
tctggcagaaatgtaggactaaaggcctatgtagtgtgccaaattcttgaaattccagtg
tccaagcaacatacattaaaatcagcaaaggtgaaagtaagaaggttttatagaccagaa
gacatttcatcagaaaaagcctacagttctgacattagagaggtgtactatagtgaaaat
gtggtctctgtgcctgttgacatgattgaaggaaaatgtgaagttcggaagaagattgat
gttttaagttttggtatacctgtgcttgatgacatattcttctgtgaatattgttatgat
cctgttaaaggaactctcaaacagttacctgccaacataaaggtatcgtctttgaaaata
aaggaagaccaaattgcctatcgaaagaaaaagggcaaggagaagtgtggagatgaattt
tctgaaaaattgactgatgtgtctcgggaaaatcatttggcaactcttgatatttttgct
ggatgtggtggcttgtctgcaggacttcagcactctggtgtttcatatacaaaatgggcc
attgaatatgaagagcctgctggtgaagcatttcgctataatcatcctgaagccttgatg
tttgtagataattgcaatgttattctcagggctattatggagaaatatggagattcagat
gattgtatctcaacgtctgaggctgctgacttggctgcttcacttgatgaggagaagctt
aaaaatctaccaaagccaggcgaagtagatttcatcaatggagggcctccatgtcaggga
ttttctgggatgaaccggtttaatcggagcacgtggagtaaagttcagtgtgaaatgatt
ttggccttcttatcatttgcagaatatttcaggcccaagttttttcttctagagaatgtt
aggaattttgtgtctttcaacaaaggacagacattcagattgactcttgcgtcactttta
gctatgggttatcaggtaaggtttggtatcctggaagctggagcctatggtgtctcccaa
tcaagaaagagggcgttcatttgggctgcttcaccagaagagactcttccagaatggcca
gaacctatccatgtgtttgctacccctgagcttaaaatttctatgcctgggaatgggtat
tatactgccgtccgaagcacagctggaggagctccttttcgttcgattactgttagggat
acaattggtgatcttccaccagttgcaaatggagctgccaaaccgacaattgattacggg
agtgagcccatatcatggtttcaaaagaatatcagaagtggcatgtcggctctaaatgac
catatatcaaaggaaatgaatgaactcaatttgataagatgccaacgcataccaaaaagg
ccaggtgctgattggcgtgatctaccagatgaaaaggttaaactgtccactggacaaatg
gttgatttgataccttggtgccttccgaacacagcaaagaggcacaatcaatggaagggg
ttgtttggtaggttggactgggatggcaacttcccgacttccatcacagatccccaacca
atgggcaaggtagggatgtgcttccacccggatcaagatagaattctcactgtccgcgaa
tgtgcaagatctcaaggtttcccagacagttaccagttctctggtaacgtccaaaacaag
cataggcaaattggaaatgctgtgccacctccattagcctatgcactcggaaggaaactt
aaggaagctgtcgaaggaaagcaatccccatcagcttaa
DBGET
integrated database retrieval system
