Zingiber officinale (ginger): 122006623
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Entry
122006623 CDS
T08725
Name
(RefSeq) small ribosomal subunit biogenesis GTPase RsgA 1, mitochondrial-like
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00730
Thiamine metabolism
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
122006623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122006623
Enzymes [BR:
zof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
122006623
Ribosome biogenesis [BR:
zof03009
]
Prokaryotic type
GTPases
122006623
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Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
ABC_tran
AAA_16
AAA_21
AAA_29
nSTAND1
AAA_23
Septin
SMC_N
AAA_22
ATP-synt_ab
nSTAND3
IIGP
AAA_7
Motif
Other DBs
NCBI-GeneID:
122006623
NCBI-ProteinID:
XP_042418124
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Position
7B:103214303..103218235
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AA seq
476 aa
AA seq
DB search
MRPFSSLAALRLQALPPASAFLRRVPSRATAALSSSFSRDTSRKPAPDKNLLKARDTVKD
IPSTSSTLDSNDERRHHLLPSQAVGLVAAAQANFMRVIVESVGGTPENPGFFGDDPRIGR
ELLCVVRALLKKIKRRVLVGDKVLVGSVDWVDSRGMIEDVFQRNSEILDPPLANVDHLLV
LFSMDQPKPEPFTLTRFLVEAESTGLPLTLAMNKLELVDDETLSAWKERLHGWGYKPLFC
SVDQKSGLAALEDILKGQTTVIVGPSGVGKSSLINSLRLTSGISDEDEIKKLLEHYERSK
WLGEQRVGNVSKGGKGKHTTRHVSLLPLSGGGYLADTPGFNQPSLMKVTKRSLADTFPEI
RTMRKASDPLKCAFSDCLHLGEPGCIIKADWERYPYYLQLLDEIRIREEFQLRTIGTKRE
GEVRYKVREMGVKQAEPLLELKKHRRVSRKRLNQSILDDIDDLEDLEDYWSEESAK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgacctttctcctcccttgctgccctacgcctccaggccctcccgccggcatccgcc
ttcctccgtcgagtcccctcacgcgcaacagccgccctctcctcctccttctcccgcgat
acctcccgtaagcccgccccagataagaacctcctcaaggccagggacaccgttaaggac
atcccctctacctcctccacgctcgattccaacgacgagcgtcgccaccacctcctcccc
tcccaggccgtcggccttgtggccgccgcccaggctaacttcatgcgtgtcatcgtggag
tctgttgggggaacccccgagaaccctggcttcttcggggacgatccgcggattgggcgg
gagctgctctgcgtcgtcagggctctgcttaaaaagattaagaggcgggtgctcgttggt
gacaaggtgcttgtcggttccgtggactgggtggacagcagggggatgatcgaggacgtg
tttcagcggaactcagagattttagatccgccgctggccaatgttgatcacctattggtg
cttttctcgatggatcagccaaagcctgagcccttcacgctaactcggttcttggttgaa
gcagaatccactggattgccgctcacgttagccatgaataaattggagctcgttgacgac
gagactttatccgcctggaaagaaaggttacatggatggggctacaaacctttattttgc
agtgttgatcagaaatctggattggctgctcttgaggacatattgaagggacaaacaact
gtaattgttggtccaagtggtgttgggaagtccagtcttatcaactccttgaggcttact
tcgggaatttctgatgaagatgaaataaagaaattacttgagcattatgaaagaagtaag
tggctgggagaacaacgtgttggcaatgtgtctaaaggtggcaaaggaaagcacactaca
agacatgtttctttgctcccgctttctggtggaggctaccttgctgacactcctggtttt
aaccagcctagtctgatgaaagttacaaagagatctcttgcagatacatttccagagatc
agaacgatgcgcaaagctagcgacccccttaaatgtgcatttagcgactgtttacacctt
ggtgaacctggatgcattatcaaggcagactgggaaagatatccatattatttacaatta
cttgatgagatcagaatcagagaggaattccaattacgaacgataggaacaaagagagaa
ggcgaagtgaggtacaaggtgcgtgaaatgggtgtcaagcaagcagaacctcttttggaa
cttaaaaaacataggagggtatcaaggaagaggctgaaccagtctattcttgatgatatt
gatgatcttgaagatctagaggactactggtcagaggaaagtgctaagtga
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