Zingiber officinale (ginger): 122006660
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Entry
122006660 CDS
T08725
Name
(RefSeq) ATPase family AAA domain-containing protein FIGL1-like isoform X1
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122006660
03400 DNA repair and recombination proteins [BR:
zof03400
]
122006660
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122006660
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122006660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
FIGL1_N
AAA_lid_3
Vps4_C
AAA_5
AAA_22
TIP49
RuvB_N
AAA_16
Mg_chelatase
AAA_14
IstB_IS21
nSTAND3
Motif
Other DBs
NCBI-GeneID:
122006660
NCBI-ProteinID:
XP_042418173
LinkDB
All DBs
Position
1A:91660199..91672582
Genome browser
AA seq
698 aa
AA seq
DB search
MAEERGGEGPERGNNSSSATMKNWRMEVDENLKRLHSLLFGVDLALERGDHSAARTLALR
LVGFLDSRTKTLADAALIAPIRSEAASKLAAASRALAPESDRQAFEQARRDVSCVFAKST
DVDIEKIKESKYFRAFVNNSKANVANSLINGTSSCKNGPKGYTVQDDQSGLLDIHDKSNA
IPAKLMTQAKITSIFGNKGSKPEITVSHMKVQNCQSNAYQECIHIDNEKTSNNILSSNKD
GPISIQAEELEKSHGISLKSKRRHLEFTSPICEKSPSSNKETNLGTSCHGFVTARTKLEM
EARQRASLASSHSATISPQTDKSSYGNTRNYGMRYGNVARRGVRGNFVPPIRSAGGNTGG
ISNSKISGKCDDGLEDSTRKCLELLCGPDGELPEKLRNLEPHLIEHISNEIMDKDPNVRW
DDIAGLEHAKKCVTEMVIWPLLRPDIFRGCRSPGRGLLLFGPPGTGKTMIGKAIAGEAKA
TFFYISASSLTSKWIGEGEKLVRALFGVASCRQPAVIFVDEIDSLLSQRKSEGEHESSRR
LKTQFLIEMEGFDSGNEQILLVGATNRPQELDEAARRRLTKRLYIPLPSAEARTWIIRNL
LMKDGLFKLSEDDLIVICKLTEGYSGSDMKNLVKDASMGPLREALSQGIEITKLRKEDMR
SVTLQDFEKALQEVRPSVSLNEMGIYEEWNKQFGSLSI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagagagaggcggagaggggccggagagggggaacaactcctcctccgccacc
atgaagaactggaggatggaggtcgacgagaacctaaagcggctccactccctcctcttc
ggcgtcgatctcgcccttgagcggggggaccactccgcggcccgaactcttgcgttgcgc
ctcgtcgggttcctcgattcgcggacgaaaacgctggcagacgccgctctcatcgctccc
atccgctccgaggccgcctccaagctcgctgccgcttcccgtgctcttgctccagaatct
gatcgacaggcatttgaacaagcaagaagagatgttagctgtgtttttgctaaatctact
gatgtggacattgagaagattaaggagtcaaaatacttccgagctttcgtcaacaactcc
aaagcaaatgttgctaatagtttgataaatggtacatcatcatgcaagaatggtcctaag
ggttacactgtccaggatgaccaatcagggttgcttgatatacacgataagtcgaacgcc
attccagcaaagcttatgacccaggcaaagataacatcaatctttggcaataaaggctca
aagccagaaattactgtttctcatatgaaagttcagaattgtcaaagcaatgcctatcag
gagtgcattcatattgacaatgaaaaaaccagtaacaatatactttccagcaacaaagat
ggccctatttctatacaagctgaagaattagaaaaatcacatggaatatctttgaaatca
aagcgccggcacttggaatttacaagcccaatctgtgaaaagtctccatcaagcaataaa
gaaactaatttgggtacttcttgccatggatttgtgactgcaaggacaaaattggaaatg
gaagctaggcaaagagctagtttggcaagttcacacagtgccaccatttccccacaaact
gataaaagttcttatgggaacacaagaaactatggtatgaggtatggcaatgttgcccgc
cgcggtgttcgaggtaactttgtgccgcctatcagatctgctggaggaaatactggtggt
ataagtaactcaaagatttcagggaagtgtgatgatggcctggaggattcaacaagaaaa
tgcttagaattattgtgtggtcctgatggtgagctaccagagaagttacggaacttggaa
cctcatctaattgaacatataagtaatgagataatggataaagaccccaatgttcgatgg
gatgatatagctggcttggagcatgctaagaaatgtgtaaccgagatggtgatatggcca
cttttacgacctgacatatttcgtggttgtcgttctccaggaagaggtctgctgttattt
ggtcctcctgggactggcaaaacaatgattggaaaagctattgctggagaggcaaaggcg
acctttttctacatatcagcgagttctttaacaagcaaatggattggtgaaggtgaaaag
ctggtcagagcactttttggagttgctagctgtcgtcagcctgctgtcatctttgtggat
gaaatcgactctctactatcacagcgcaagtctgaaggtgagcatgaatcaagtaggcgg
ctaaaaacacagtttctgattgaaatggaaggttttgacagtggaaatgaacagattctg
cttgtaggagccacaaatcggcctcaggaacttgatgaggcagctcgtaggcgattgact
aaacgcttatatataccccttccatcagcagaagcaagaacttggattattcgaaatctt
ttgatgaaggatgggctatttaagctttcagaagatgacttgattgtgatctgcaaattg
actgaaggttattcaggatcagacatgaagaacctcgtgaaagatgcatccatggggcca
cttagagaagccctgagtcagggtatcgagatcacaaaacttagaaaggaggatatgcgg
tctgtcacccttcaggatttcgagaaggcactgcaagaggttagaccttctgtttcttta
aatgagatgggcatctatgaggagtggaacaaacaatttggaagcttatcgatatag
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