Zingiber officinale (ginger): 122006702
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Entry
122006702 CDS
T08725
Name
(RefSeq) ABC transporter B family member 20-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122006702
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122006702
04147 Exosome [BR:
zof04147
]
122006702
04090 CD molecules [BR:
zof04090
]
122006702
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122006702
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122006702
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122006702
CD molecules [BR:
zof04090
]
Proteins
122006702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_15
RsgA_GTPase
AAA_16
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
122006702
NCBI-ProteinID:
XP_042418231
LinkDB
All DBs
Position
7B:105337201..105350008
Genome browser
AA seq
1391 aa
AA seq
DB search
MMSSRGLFGWSPPHVQPLTPVSEVSEPPESPSPYMDSGVEVVPVEDDVAVDEMEEIEPPP
AAVPFSRLFACADKLDWVLMVVGAVAAAAHGMALVVYLHFFGRAINLLDSQNEALFGKIK
QHALYIIYIAVGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDI
VSQVLSDVLLIQSALSEKVGNYIHNMATFFGGLIIGLINCWQIALLTLATGPFIVAAGGI
SNIFLHRLAENIQDAYAEAASIAEQAISYIRTLYAFTNDTLAKYSYATSLQATLRYGILI
SLVQGLGLGFTYGLAICSCALQLWVGRFLISNGKANGGEIITALFAVILSGLGLNQAATN
FYSFEQGRIAAYRLYEMISRSNSSLNQDGSILATVQGNIEFRNVYFSYLSRPEIPILSGF
YLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKHLKLEWLRSQIGLV
TQEPALLSLSIKDNIAYGRSATSDQIEEAAKTAHAHAFITSLEMGYETQVGRTGLALTEE
QKIKISIARAVLSNPSILLLDEVTGGLDFEAERVVQEALDILMLGRSTIIIARRLSLIRN
ADYIAVMEEGQLMEMGTHDELLNRDGLYAELLRCEEASKLPRRMPIRNYKDSTFQIEKDL
SGSQGLQESSSPMMSKSPSLQRAHGSLASRQPDIYNSHESSKSQSPPSELMVENGFPLIS
SERIPSIKRQDSFEMRLPELPKIDVHSINPQFSNTSDPESPISPLLTSDPKNERSHSKTF
SRPLNQFDHMYSNQKELAIHKPPSFWRLVELCLAEWFCALLGSTGAAIFGSFNPLLAYII
ALIVAAYYRIDVRDVHNEVNKWCLIIACMGVVTVIANFLQHFYFGIMGEKMTERVRRMMF
SAMLRNEVGWFDEEENSADTLSMHLANDATFVRAAFSNRLSIFVQDTAAVAVALLIGMLL
EWRVALVALATLPILVVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAG
NKVMELYRLQLSRILKQSFVQGMAIGFSFGFSQFLLFACNSLLLWYTAVSVHEGRITIAT
ALKEYIVFTFTTFALVEPFGLAPYILKRRKSLTSVFDIIDRVPTIDPDDTTGMKPPNIYG
SIELKSVDFCYPTRPEMMVLSNFSLKVSGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQ
ILLDGRDLKLFNLRWLRSHMGLVQQEPVIFSTTIRENIIYARHNATEAEMKEAARIANAH
HFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQ
EALGTLIMGNKTTILIAHRATMMKHVDNIVVLNGGSIVEQGSHESLVQKNGLYVRLMQPH
FSKGLRQHRLI
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcgaggggtctgtttggatggtcgccaccccatgtgcagccgctgacgccg
gtctcggaggtttcggaaccgccggagtcgccgtctccgtacatggacagcggggtggaa
gtggttcctgtggaggacgacgttgctgtcgacgagatggaggagatagagccgcctccg
gctgcggtgcccttctccagactatttgcctgcgcagataagctcgattgggtgctgatg
gtggtcggggctgtagctgccgccgctcacgggatggcgctggtggtctacttgcatttc
tttgggagggccatcaacttgctagactcgcagaatgaggcgctgtttggtaaaatcaag
cagcatgccctgtatatcatttacatagctgtaggagtatttgctgctggttggatagag
gtctcctgctggattcttactggagagaggcagactgcagtcattaggtcaaagtatgtc
caagtcttactaaaccaggacatgagtttttttgacacctacgggaataatggagatata
gttagccaagtattgagtgatgtgctgctgatccagtctgctctaagtgaaaaagttgga
aactatattcataacatggcaacattctttggtggtcttatcattggtttgatcaattgt
tggcagatagcacttttaacactagcaactggtcctttcattgttgcagcaggaggaata
tctaatatttttctccatcggttagctgaaaatattcaagatgcatatgctgaagctgca
agtattgcagagcaggcgatttcatacattagaacattgtatgcctttacaaatgatact
cttgctaagtattcttatgcaacctcacttcaagctacactaaggtatggaatactgatt
agtctagtgcaaggccttggtcttggcttcacatatggtcttgctatatgttcttgtgct
ttacaactttgggttgggaggttcctgatttcaaatggaaaagctaatggtggagaaatt
attacagctttgtttgctgtaattttgagtggccttggacttaatcaagcggctaccaat
ttctattcatttgagcaagggagaattgctgcttacagactttatgagatgataagccgt
tcaaattcttctcttaaccaggatggaagtatcttagctacagtgcaaggaaatattgag
ttcaggaatgtttacttcagctatctttcacgtccagaaattcccatactgagtggcttt
tacctaactgtacctgctagaaaaactgtggcccttgttggtaggaatggctctggaaaa
agtagtataattcctcttatggagcgtttctatgatcctaccttaggggaagttctattg
gatggggagaatataaaacatctgaagttggaatggttgagaagccaaattggactagtt
acccaggaaccagctttgttaagtttgagcatcaaggataatatagcttatggaagatct
gctacatctgatcagattgaagaagctgctaaaacagctcatgcacatgctttcataact
tctcttgaaatgggatacgaaactcaggttggtaggactggtttagcattgactgaagaa
cagaaaataaaaatctcaatagctcgtgctgtgctttcaaatccttctattcttctattg
gatgaggtcacaggtggacttgattttgaggcagaaagggttgttcaagaggctctggat
attctcatgttggggagatccactattataatagctaggcgacttagtcttattcgcaat
gctgattatatagcagtaatggaggagggtcaactgatggaaatgggcacccatgatgag
ttattgaatcgagatggcttatatgcagaacttctgagatgtgaagaagcatcaaagctt
cccaggaggatgcccataaggaattacaaagactcaacttttcaaatcgaaaaggattta
tcaggaagtcaaggtcttcaagaatcatcttctccaatgatgtcaaaatcaccttctctt
cagagagcacatggtagtcttgcaagtcgacagcctgatatttataactcacatgaatca
tcaaagagtcaaagcccaccttcagagctaatggtggaaaatgggtttcctctgatttct
tcagaaagaatcccatctatcaaaaggcaggacagctttgagatgagattacctgagctt
cctaaaatagatgtgcattctataaacccccaattttcaaatacctcagatccagaatct
cctatttctccgttgctcacatctgatcctaaaaatgagcgctctcattcgaaaactttc
agccgtcctctaaatcaatttgatcacatgtattctaatcagaaggagcttgcaatccac
aaacctccatccttttggaggcttgtggaactctgtttggctgaatggttttgtgctctt
ctaggaagtactggtgctgcaattttcggatcatttaatcccctccttgcttacattatt
gcacttattgtggcagcatattatagaatagatgtccgtgatgtccataatgaagtgaac
aagtggtgtttgattattgcatgcatgggtgttgttactgtgattgcaaattttttgcag
cacttctattttggtataatgggggagaagatgactgagcgggttagaaggatgatgttc
tccgcaatgttacgcaatgaagttgggtggtttgatgaagaagagaacagtgctgataca
ttgtccatgcatctagctaatgatgcaacatttgttcgtgctgcattcagtaaccgactt
tctatatttgtacaagacactgcagctgtagctgttgctcttcttatagggatgctgcta
gaatggcgtgtggcacttgttgcactggctactctacctatattagtagtttctgctatt
gcacagaaattatggcttgctggattttctagaggcattcaggagatgcacaggaaagcc
tcgttagtccttgaggatgctgttcgaaacatttataccgttgttgcattttgtgccggt
aataaggtaatggaactttacaggctgcagctcagcagaattctgaaacagagttttgtc
cagggaatggctattggatttagttttggcttctcacagttccttctttttgcctgtaac
tctcttcttctttggtacactgctgtgtctgtgcatgaaggccgaatcacaatagccaca
gcattaaaagagtacatcgttttcacttttactacctttgctttagtggagccatttggt
cttgctccttacattctaaaacgccgaaagtcccttacctcagtatttgacattatagac
cgggtacccactatagatccggatgacaccactggcatgaaaccacctaatatctatggg
agcattgagttaaaaagtgttgatttctgttatcctaccagacctgaaatgatggtgctc
agcaatttcagccttaaagttagtggggggcaaacagttgcagttgtgggtgtatctgga
tctgggaaaagcactataatatctttaattgagagattttatgatcctgttgctggccaa
atattgttggacggacgtgatctaaagcttttcaacttaagatggttgcgcagccatatg
ggcctggttcaacaggagcctgtcatattttcaacaactataagagagaatatcatctat
gcaaggcacaatgcaactgaggccgagatgaaagaagctgcaaggatagctaatgcacat
cacttcatcagcagtctgccacatggttatgacacacatgtgggcatgagaggggttgat
ttgacacccggacagaagcaacggattgcaattgctagggtagtgttgaagaatgctccc
atattgttgttggacgaggcaagctcttctattgaatctgaatcaagtcgagtggtgcag
gaggcacttggcacgctgattatgggtaacaaaaccacaattcttattgcacatcgtgca
accatgatgaagcatgtggacaacattgtcgtccttaatggtggcagcatagttgaacag
ggttcacacgagtccttggttcagaagaatggcttgtacgtcaggttgatgcagcctcac
ttcagcaaaggccttcgtcagcatcggcttatttag
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