Zingiber officinale (ginger): 122006727
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Entry
122006727 CDS
T08725
Name
(RefSeq) nuclear matrix constituent protein 1b-like
KO
K27866
protein CROWDED NUCLEI
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122006727
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
122006727
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
122006727
NCBI-ProteinID:
XP_042418260
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Position
7B:105796861..105803988
Genome browser
AA seq
1117 aa
AA seq
DB search
MASPRPAAMTPASLTIDALRTPLGDDAIWKRLREAGLDEESVKRRDKAALIAYITKLETE
IYDYQHHMGLLILERKELLSKHEQIKASSDSTDIIYKREEAKRLSALAEARKREKSLEKL
LGIQKECVSNIERALHENLVESAERKVEYEHKIAETQTKMEEAELKFDEAKRKLLAAESL
QAEATRARNSTLRTLDDIEAREDDLRRRHSTFKSECDAKENEMNLQREALYESQKALYEQ
QERLLDSQKLLNQREEFIFERTKELNCLEKELEEAKANHEEEARSLKVEKSNFDLEVAAF
ATREEAIVKRETMLDKKERDLIVLQEKILCKEQDEIKRIQMEHEALLEKRKIELENEIEQ
RHLKLKNELEARQSALEAKGADLSIREIAIGEKEHAIVLQLSEFAEKQEDVANKLRLLEE
KEKSLIFSQREAEVAIQKQQKERESILELKLGLEKTKSSLEDKKKEILLLEERLEITSIE
RNKLHVLEYELKGEIDSLRAQKLVLLIETETLKAEKEKFESDWELMEEKTQDLKKEAARL
EEESKAVARYLKKEKENIKLEKDNLHNKFKRDSEHLSSEREEFIQEMDRQHSDWFTKVQH
ERDELVRDINFQRKELENSIKKKKEEIEAHLREREEAFEQEKTKELQYISSQKELIAKQL
EHVALEMQKLNTERAEIAQDREQRENDWAEMKKFTEALDGQCQKLQKQRQLLHADREEID
QKIQHLKYLENLHIESENRALSDVVQIDKCKTPVLKKHQSNDASLGEIITNDYCTKKLGS
QSTLTTSISPDTKSWIRRCTEVIFKYSFDKDSDTEKVENELKEKFRDFGSTEVGLHLNKN
AIADKQTNAPKVGNLQDLSVIPKKTSSNEHDKLYGAEIEQVRYSLDGQNQMRDAKPVFDA
HSPSVVGTSSRRSPGHFENSVQKSRILNRVNSWLLGQKRPNSMLSDNHADIPSEEILKSQ
KRARQNGNSGTDGNSSNCVEPHPGEESVSVLHKHKSGLEETLHAVFKDREPQTKMESKFG
IVKNGASCKFEHSSLAGDVTVLPSQDANKTNAYKKDSSEEHSEEVIVPPSDHVVKDNGKL
KMQEKLNQDADESEDEDEDDNETPSSVKQKLWNFLVT
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccctcggccggcagcgatgacgccggcgtctctcaccatcgatgccctcagg
actccgctcggggacgacgcgatctggaagaggctaagggaggccggtctggacgaggag
tctgtgaagaggagggataaggccgcactgatagcttatatcacgaagctggaaacggag
atctatgactatcaacaccacatgggacttcttattttggagagaaaggaattgctttct
aagcatgagcaaattaaagcatcctcagactcaaccgacattatatataaacgagaagaa
gctaagcggctatctgctttagctgaagcccgtaaacgggaaaaaagtcttgaaaagctt
ttgggaatacagaaagagtgtgtttcaaatattgagagggctttgcatgagaatctagtg
gaatctgctgaaagaaaggttgaatatgaacacaaaattgcagaaactcagacaaagatg
gaagaagcagaactgaaatttgatgaggctaaaagaaagctacttgcagcagaatctttg
caagcagaagcaaccagagcacgtaattccacattaaggacattagatgatattgaagct
cgggaagatgatctcaggaggcgccattctactttcaagtctgagtgtgatgctaaggaa
aatgagatgaaccttcaaagagaagccttatatgagagccaaaaagctctgtatgaacaa
caagaaagattactggatagtcagaaattattaaatcagagggaggaattcatctttgaa
aggacgaaagagttaaattgccttgagaaagaacttgaggaagccaaggctaatcatgag
gaagaagctcgatctctcaaagtagaaaaatccaactttgatctagaagttgctgctttt
gcaactagagaagaggccattgttaaacgtgaaacaatgctcgataaaaaagagcgcgat
ttaattgttttacaggaaaagattttgtgcaaagaacaggatgaaattaaaagaattcag
atggaacacgaagctcttttagagaagagaaaaattgaattggaaaatgaaattgaacag
cgacacctaaagttgaagaacgaacttgaggctagacaatctgcactagaggctaagggg
gctgatctctctattagagaaattgctattggtgaaaaagaacatgctattgttttgcag
ctttctgagtttgctgagaagcaagaggatgtggctaacaaactgagattacttgaggag
aaagaaaaaagtttaattttttcacaaagagaagcagaggttgcaattcaaaagcagcag
aaggaaagagaaagtattcttgagttgaagctaggtcttgagaaaactaaatctagttta
gaagacaaaaagaaagagattcttcttttggaagaaaggttagaaatcacctcaatagag
agaaataaattgcatgttctagaatatgaactcaaaggagaaattgacagtctcagagcc
cagaaactggtgcttcttattgaaactgaaacactgaaggctgaaaaggagaaatttgaa
tctgattgggagcttatggaagagaaaacacaagacctaaaaaaagaagcagcaaggctt
gaggaagagagtaaagcagttgcccgctacctcaagaaagaaaaggaaaacattaagctg
gagaaggacaaccttcacaataagttcaagagagatagtgagcatttgtctagtgagagg
gaggaatttatccaagaaatggatcgacaacattcagattggtttactaaggttcagcat
gaaagggatgagcttgtcagggatatcaattttcagaggaaggaattagaaaatagtatc
aagaaaaagaaggaagaaattgaagcacacttgagagaaagggaagaggcatttgaacaa
gagaagaccaaagagcttcaatatataagttctcaaaaggaacttattgcaaagcagctg
gaacacgttgcattggagatgcaaaaacttaacactgagagagcggagattgctcaggat
cgtgaacagagagaaaatgactgggctgaaatgaagaagtttacagaggcactagacggt
caatgtcaaaagctgcaaaaacagagacaattacttcatgctgatcgagaagaaattgat
caaaaaattcaacaccttaaatatttggagaatttgcatattgaatctgaaaatagagca
ttatctgatgttgtgcagattgataaatgcaagactcctgtcctaaagaaacaccaatcc
aatgatgcttcccttggagagattattactaatgattattgtacaaagaagttgggttct
cagagtaccttaactacttctatctctcctgacactaaatcatggatcaggagatgcact
gaggtaattttcaagtattcatttgataaagattctgatactgagaaggtggagaatgaa
ctgaaagagaaatttagggattttggatcaacagaggttggtcttcatctgaataagaat
gccattgctgataaacaaactaatgctccaaaagtaggcaatcttcaggatttatctgtt
attcccaagaagaccagctctaatgagcatgacaaactatatggagcagagattgagcaa
gtgagatatagtttggatggacagaatcagatgcgtgatgcgaaaccagtttttgatgct
catagcccatctgtagttggaacaagtagccgtagatctcctggacactttgagaattct
gtacagaaatctagaattcttaacagggtcaattcatggctgttaggacaaaagagaccg
aacagcatgctctctgataatcatgcagatattccttcggaagaaattctgaagtcacag
aaaagagctaggcaaaatggaaattctggcactgacgggaattcttctaactgtgttgaa
ccacatccaggagaggaatctgtatcagtgttgcacaagcataaatcaggtttggaagaa
actttgcatgcagttttcaaggatagagagccacaaactaaaatggagtcaaagtttggc
attgtaaaaaatggggcatcttgcaaatttgagcactcttcacttgctggagatgtaaca
gttttgcccagccaagatgctaataaaactaatgcatacaagaaggattcatctgaggaa
cattctgaagaagttattgtgcctcccagtgatcatgtcgttaaggataatggcaagctt
aaaatgcaagagaaactcaaccaggatgctgatgaatcagaagatgaagacgaagatgac
aatgaaacaccatcatctgtgaagcaaaaattatggaacttccttgtcacctga
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