Zingiber officinale (ginger): 122006837
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Entry
122006837 CDS
T08725
Name
(RefSeq) YTH domain-containing protein ECT1-like isoform X1
KO
K20102
YTH domain-containing family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122006837
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122006837
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
NUC153
Motif
Other DBs
NCBI-GeneID:
122006837
NCBI-ProteinID:
XP_042418419
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All DBs
Position
7B:complement(109085078..109090472)
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AA seq
582 aa
AA seq
DB search
MDAKARPAKPIDEAIKTLKIDPPSKATSVTMFGAKGASLSDATSCISSGDATSIIKESEV
DQDVSVDDQGTYYNGYYYPGSHGVMGEWDNSRCNRGTDNVQVEHPVSTIQVDSGSLIYYL
PGFQTGYSNYGPFSPGPMYCADGQFWGQGSYYASPVSPQTVVSPGIYAHPIAYGPELIPA
YPWDPYFFLQDGIQGNTFTVDPTNPHYKPNHSSHGHNLPPSKTLTTSKVTSLASDLSLPV
SAQNQTQKSVQKAPTAVLPKGYVPLNKFSAYANQVNGALHYPNAVIPMNENTRCWVDDEK
LKARNKLNSFADLDRGPRTNSIKTTNSGDNFQETLSIKQNDNSSGSIDKDEYNSPDFITK
YEQALFFIIKSYSEDDVHKSIKYNVWSSTPNGNKRLDNAFLAAQGKMAEKGGKCPVFLFF
SVNASGQFCGVAEMSGRVDFSKNMPFWQQDKWNGFFPVKWHIIKDVSNPRLRHIILENNE
NKPVTNSRDTQEVKFPQGTEMLNIFKSYSAKTSILDDFGFYENRQKAMQEKRGKPTTPTL
DNSLSKMVESSQFQKLDDSKSHKLVLVEVKEALPCSRVTSPK
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggacgctaaggcgaggccggcgaagcccattgatgaagcaattaagacattgaagatc
gatcctccgtcaaaagccaccagtgtcaccatgttcggtgcaaaaggtgcaagcttgtct
gatgcaacatcctgcatctcttccggagatgcaacaagcatcatcaaggaaagcgaggta
gaccaagatgtgtctgtggatgatcagggcacatattataatggttactattatccagga
tctcatggtgtcatgggggaatgggataattcacgttgcaaccgtggaacagataacgtc
caagtagagcatcctgtaagtaccattcaagttgatagtggatcgctgatatactacttg
ccaggatttcaaactggatatagcaactacggtccattctcacctggacccatgtattgt
gctgatggacagttttgggggcaaggctcatattatgcaagtccagtttctcctcaaacg
gttgtttcgccaggaatttatgctcatccaattgcttatgggcctgagctaattcctgca
tacccatgggatccatattttttcttgcaagatgggattcaagggaacacatttactgtg
gatccaacaaatccacattataaaccaaatcattcatcccatggtcataaccttcctcct
tccaaaaccttgacaacttcaaaagtgacttcactagcatctgatttatcacttcctgta
tcagctcaaaaccaaacacagaaatctgtgcagaaggcacccactgctgttttacccaaa
ggatatgttcctctaaataagttcagtgcatatgctaaccaagtgaatggtgcattgcat
tatccaaacgctgtcattcctatgaacgaaaatacacgttgctgggttgatgatgaaaag
ctgaaagccagaaataagcttaatagttttgctgatctggaccgtggtcctagaacaaat
agcatcaaaactactaattctggcgataattttcaggaaactcttagcatcaaacagaat
gataatagcagtggttcaattgacaaggatgaatacaactctcctgatttcataacgaag
tatgaacaagctttgttttttataataaaatcatacagcgaagatgatgttcataaaagt
ataaaatataatgtctggtcaagcactccaaatgggaacaaaaggcttgacaatgccttc
ctagctgctcaaggaaagatggcagaaaagggtggcaagtgtcctgtgtttctcttcttt
tctgttaatgcaagcggtcaattttgtggtgttgcagaaatgtcaggccgagttgatttc
agtaaaaatatgcccttttggcaacaggacaaatggaatggctttttcccagtgaagtgg
catataattaaagatgtttcaaacccacgactccgtcacataatattggagaataatgag
aacaagcctgtaacaaacagcagggatacgcaagaggttaagtttccacaaggcactgag
atgttaaacattttcaagagctattctgctaaaacgtccatattggacgactttggcttt
tacgagaatcgccagaaagcaatgcaagagaagaggggcaagcctactactccaactttg
gataactctctgtccaaaatggttgaatcatctcaattccagaagctagatgattccaaa
tcacataaacttgtgttagtcgaggtgaaggaagcactcccttgctcgagggtcacttca
cctaagtga
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