Zingiber officinale (ginger): 122006868
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Entry
122006868 CDS
T08725
Name
(RefSeq) sister chromatid cohesion protein SCC4-like
KO
K11266
MAternally affected uncoordination
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122006868
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
122006868
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cohesin_load
TPR_12
Motif
Other DBs
NCBI-GeneID:
122006868
NCBI-ProteinID:
XP_042418475
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All DBs
Position
7B:109909485..109921332
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AA seq
721 aa
AA seq
DB search
MEAVVEGLWSLAEEAELRRDYGAAVKCLEALLQSDASLLPLVEIRTRLRLAYLLLNRSYN
LNHAKAHLERGLLLLSSAPSASLHLKLSAHSLLARCYHLVGAIPAQKHIILRALNLLSSS
ADGRGAAGLPATDTLLWSANFHSQLGSNLAIDGDYPGALSTLASGLAAATELGSSELQLF
FAASSLHVHLLHWEDSHSVEANVRQCLELWESIPFDQRQHHIGLFFYNELLQTFYLLRIC
DYKAAAQHVEKLDAAMKNEHQKVQYIKELVQDLNSVNGMLSRSNLQKKDRLALFEKQGQI
QEQLRAATGEDSTRRLLDIEEKLLLAPPPMDGEWLPRAAVFALVDLMVVMLNRPKGVFKE
CGRRIQSGLELIYEELEKLGIADGSREVDLQHSAIWMAGVYLVLLMQFLENKVAVELTRS
EFVDAQEALMQMKNWFIRFPTILQGCESTIEMLRGHYSHSVGCFHEAVFHFVEATKLTES
RSVQSVCQVYAAVSYICIGDPESSSKALDLVGPVFRIMDSFVGVREKTCIIFVYGLLLMR
QHNLQEARIRLASGLKIAHQQLGNIQLVSQYLTILGTLALQLHDTVQAREILKSSLTLAK
TLYDIPTQIWVLSVLTALYQEIGERGNEMENSEYERKKEDDLQKRLSEALSHLHHQDLIE
RVRFSVQQPHELATRRVISGPSAKVDLDIPESVGVPMPQPAAMLSSKLREIDSVRRGKMK
M
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgtcgtggagggcctgtggtcgctggcggaggaggcggagctccgccgcgac
tacggcgccgccgtcaagtgcctggaggccctcctccagtcggacgcatccctcctcccc
ctcgtcgagatccgcacacggcttcgcctcgcttacctcctcctcaaccgctcctacaat
ctcaaccacgccaaagcgcacctcgagcgcggactcctcctcctctcctcggctccctcc
gcttccctccacctcaagctcagcgcgcactccctcctcgctcgatgctatcacctcgtc
ggcgccatcccggctcagaagcatatcatcctccgcgccctcaacctgctctcctcctcc
gctgatggccgcggcgccgccggcctccctgcgactgacactctgctctggtcagccaac
ttccattcccagctcggttctaaccttgctattgatggggattacccaggtgcgctctcc
actctggcctctggtcttgctgcggcgactgagctaggcagttccgagcttcagctcttc
tttgccgcctcttctctccacgtgcatctccttcactgggaagactctcattcagttgag
gctaatgttcgccagtgccttgagctctgggaatccatccctttcgatcagagacagcac
cacattggcctgtttttctacaacgagttgctccaaacgttctatttactgaggatatgc
gactacaaggcggcggctcaacacgttgaaaaacttgatgctgccatgaagaacgagcac
cagaaggttcaatatattaaagaattggtccaagaccttaattctgtgaatggtatgctc
tcccgttcgaatttgcaaaagaaagatagattggctctgtttgagaagcagggccagatt
caagagcaattgagagcagctactggcgaggattcaactaggaggttgttggacattgag
gagaagttgctgttggcgcctccacctatggatggggagtggcttccgagagctgctgtt
tttgcattggtggatctaatggttgtcatgttgaatcgcccaaaaggagtatttaaggag
tgtggaaggaggatacaatctggattggagctaatttatgaggaacttgagaaattggga
attgccgatggctcgagagaggtggatttgcagcactcggcaatttggatggccggggtt
tatttggtgcttctcatgcagttcttggagaataaagtagctgtagaacttactcggtca
gagtttgttgatgctcaagaggccttaatgcaaatgaagaattggtttatccgtttccca
acaatccttcaaggatgtgaaagcactattgagatgttaagagggcattattctcactct
gttggttgcttccatgaggcagtttttcattttgttgaagctacaaagctcactgaaagc
agatctgtgcaatctgtgtgccaagtttatgcagctgtctcctatatttgtataggggat
cccgaatcatcttctaaggccctcgatttggtagggccagtattcagaatcatggattca
tttgttggtgtacgagaaaaaacatgtattatctttgtttacggccttctgctgatgagg
caacataatctacaagaggcacgaatccgactcgccagtggcttgaaaatcgcacaccaa
caattgggtaatattcaactcgtatctcagtacttgaccatcttaggtactttagccctt
cagctacatgacactgttcaagctagggagatattaaagtcatcattgacacttgcaaag
acgctttatgacattccaacccagatatgggtactttctgtcttgacagcattgtaccaa
gaaattggagagaggggaaatgaaatggagaactcagaatatgaaagaaaaaaggaagat
gacttgcaaaagaggttatctgaagctctttcccaccttcatcaccaggacctgattgaa
agggtaagattcagtgttcagcaaccacatgaactcgccaccagaagagtgatctctggt
ccatcagcaaaagttgacctggacattcctgaatcagttggtgtgcccatgcctcaacct
gctgcaatgttatcctcaaagttgcgagaaattgactcagtgaggcgagggaagatgaag
atgtag
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