Zingiber officinale (ginger): 122006959
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Entry
122006959 CDS
T08725
Name
(RefSeq) beta-hexosaminidase 1-like isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00511
Other glycan degradation
zof00513
Various types of N-glycan biosynthesis
zof00520
Amino sugar and nucleotide sugar metabolism
zof00531
Glycosaminoglycan degradation
zof00600
Sphingolipid metabolism
zof00603
Glycosphingolipid biosynthesis - globo and isoglobo series
zof00604
Glycosphingolipid biosynthesis - ganglio series
zof01100
Metabolic pathways
zof04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122006959
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
122006959
00513 Various types of N-glycan biosynthesis
122006959
00531 Glycosaminoglycan degradation
122006959
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
122006959
00604 Glycosphingolipid biosynthesis - ganglio series
122006959
00511 Other glycan degradation
122006959
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122006959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122006959
Enzymes [BR:
zof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
122006959
Chaperones and folding catalysts [BR:
zof03110
]
Intramolecular chaperones
Others
122006959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
122006959
NCBI-ProteinID:
XP_042418599
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All DBs
Position
7B:complement(112854017..112905532)
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AA seq
548 aa
AA seq
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MPSEAVCFLLLLLLSLLTPPSHGRSIPRRSIPRRHWIPSTNDSPVYLWPLPKQFNHGDGI
LCVDPDLSLDLQVPGDYLEIVSDAFERYKDLIFTHWERSARRSSAEYDVAKMTVIVSSTN
DTLQFGVDESYMLYVGRGDGLSVVKGATIEANTIYGALRGLETFSQLCIPNYENKSVEIQ
KAPWSIKDEPRFNFRGLLIDTSRHYLPVNVIKQVIDAMSYAKLNVLHWHILDEESFPLEV
PSYPNLWKGSYSKLERYTIEDAYEVVDFAKKRGIHIMAEVDVPGHAESWGSGYPDLWPSA
NCTEPLDVSKNFTFEVISGILSDMRKIFPFELFHLGGDEVHTDCWSSTPHVKQWLQERNM
TNKEAYQYFVLRAQKIAADLGWIPVNWEETFNTFNKSLNPQTVVHNWWGPGVCPEVVEKG
FRCIVSNQGVWYLDHLDIPWEDFYTNEPLEGINNTAQQNLVLGGEVCMWGEMADTSVVQQ
TIWPRAAAAAERLWSPLESTSTGNLNTTVLPRLHYFRCLLNRRGIAAAPVTNKYARSPPY
GPDSCYVQ
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgaggccgtttgtttcctcctcctcctattactctccctcctcaccccgccc
tcccatggccggagcatccctcgccggagcatccctcgtcgccactggatcccctccact
aacgattcccctgtctacctctggccccttcccaagcaattcaaccacggcgatggtatc
ctctgcgtggatcctgacctatcgctcgacctccaggtacccggagactacttagaaatc
gtatctgatgcgttcgagaggtataaagatctgatttttacgcactgggagaggtccgct
cgccggagctccgcagagtacgatgtcgcgaagatgacggtgatcgtttcttcaactaat
gatacgcttcaattcggtgtcgatgagagctatatgctatacgtgggtagaggagatggg
ctttcagttgttaaaggagctacgatcgaggctaatactatttacggggctctgcgaggc
ttagagactttcagtcaattatgcatacccaactacgaaaataaaagtgttgaaattcag
aaagcgccatggtccatcaaagacgaacctcgatttaacttccgagggcttctaatcgac
acctcacggcattacttacctgtgaatgtgattaagcaagtgattgatgctatgtcctat
gctaaacttaatgttcttcattggcacattttagatgaagaatcattccctttagaggta
ccttcatatccaaatttgtggaaaggttcttactcaaagttggagcgatacacaattgaa
gatgcttatgaagttgttgactttgcaaagaaaagaggaatccacattatggctgaagtt
gatgtccctgggcacgctgaatcctggggttctggttatcctgatctatggccttctgct
aattgtacagagcccctggatgtgagcaaaaattttactttcgaagtaatttctggaatt
ttgtctgatatgagaaagatctttccatttgaactttttcacttggggggagatgaagtc
catactgattgttggtcttcaactcctcatgtcaagcaatggcttcaggagcgaaacatg
actaataaggaagcataccaatattttgtattgagggctcagaagatagctgcagatctt
ggttggattcctgttaactgggaagagacattcaatacattcaacaaaagcctcaatcca
cagactgttgtacataattggtggggtcctggagtctgtccagaagtggttgagaagggt
tttagatgtattgtaagcaaccaaggtgtctggtatcttgatcatcttgatatcccatgg
gaggacttctacaccaatgagccattagaagggataaacaatacggcacaacagaatctt
gtgcttggtggtgaagtttgcatgtggggagagatggctgatacatctgttgttcagcaa
acaatctggcctcgtgctgctgcagctgcagagcgcttgtggagccccttggagtcaacc
tccaccggtaacctcaacaccaccgtgttgccgcgcttacattacttcagatgtttgttg
aaccgccgaggaatagctgctgctccagtgaccaacaagtatgctcgaagccccccttat
ggtcctgattcctgctatgttcaataa
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