Zingiber officinale (ginger): 122007020
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Entry
122007020 CDS
T08725
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' alpha isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03015
mRNA surveillance pathway
zof04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122007020
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122007020
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122007020
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122007020
03036 Chromosome and associated proteins [BR:
zof03036
]
122007020
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122007020
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122007020
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122007020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Rsd_AlgQ
PDGF
Ku_PK_bind
Motif
Other DBs
NCBI-GeneID:
122007020
NCBI-ProteinID:
XP_042418697
LinkDB
All DBs
Position
7B:114805907..114807693
Genome browser
AA seq
452 aa
AA seq
DB search
MGFFGPRHAVKSPPLPQRKSTTLRRLFDLDSQIDALSPYPPAAPSADAETKQLLSAISYC
TTAVFNFVDPAESPAQQDLKRRQLSHVLSAVREIKALPFLDEAVWKPLLAMLAANLFRPL
PPPAHPSLPPDLLDEDGGGYAMALAPDWPHLHIAYDILSTAVAEADERTLRRHIDRGFLR
GLVSLFQSEDPRERDRLKVVYHQLYSKLAPDRGFMRRQMVCALAHQVFDAEPRPFGTAEL
LEIWGSIICGFAVPLKEEHRVFLSRILVPLHKAKCVGAYHRQLAYCVTQFVAKEPGLGEV
VAKGILRHWPSTNCHKEVLLLEELEELVESSDVGDLQKVAVPICNRVARCSGSTNSQVAE
RALCMWNNEQFVKMASRCWEQVLPAIVESVEKNIEWHWSKSVQELATSLKRMLEEVEPAL
YSRFLLQLQRKEADMAEEERKRKMRWERLEMA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgggctttttcggcccgaggcacgccgtaaagtcgcctcctttaccccagcggaagtcc
accacccttcgtcggctcttcgacctcgactcccaaatcgacgccctgtcgccgtaccct
cccgccgctccctccgctgatgcagagaccaaacagcttctttccgccatttcctactgc
accaccgccgtgttcaacttcgtcgaccctgctgagtcgccggcgcagcaggacctcaag
cgacggcagctgtcgcacgtcctcagcgccgtccgggagataaaggcgcttcctttcctc
gacgaagctgtctggaagccgctcctcgccatgctcgccgccaacctcttccgcccgctc
cctccgccggcgcacccctctttgccgccggacctcctcgacgaggacggcggcggctac
gcgatggcgctcgctcccgattggccccacctccacatcgcgtacgacatcctctccacg
gccgtggccgaggccgacgagcggacgctccgccgccacatcgaccgcgggttcctccgc
ggcctcgtctcgctgttccagtcggaggacccgcgggagcgagaccggctcaaggtggtg
taccaccagctgtactcgaagctggccccggaccgcgggttcatgcggaggcagatggtg
tgcgcgctcgcgcaccaggtgttcgacgcggagccgcggcccttcgggacggcggagctg
ctagagatctggggcagcatcatctgcggcttcgccgtgccgctcaaggaggagcaccgc
gtgttcctaagccgcattctggtgccactgcacaaggccaagtgcgtcggcgcgtaccac
cggcagctggcctactgcgtaacccaatttgtggccaaggagccggggctgggggaggtg
gtagcgaaggggatcctacggcattggccgtcaacaaactgccacaaggaggtgctgctg
ctggaagagctggaggagctggtggagtcgtcggacgtcggcgacttgcagaaggtggcc
gtgccaatctgcaaccgtgtagcccgctgctccggcagcacaaactctcaggtggcagag
agagctctgtgcatgtggaacaacgagcaattcgtgaagatggcgtcgcggtgctgggag
caagttctcccggccatcgtggaatccgtggagaagaacatcgagtggcactggagcaaa
tcggtgcaggagttggccacctcgctgaagagaatgctggaggaggtggagccggcgctg
tactcgaggtttctgctgcagctgcaacgcaaggaggcagacatggcggaggaggagagg
aagaggaagatgaggtgggagagactagagatggcttag
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