Zingiber officinale (ginger): 122007072
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Entry
122007072 CDS
T08725
Name
(RefSeq) clustered mitochondria protein-like
KO
K03255
protein TIF31
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
zof03012
]
122007072
Translation factors [BR:
zof03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122007072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_12
TPR_10
TPR_NPHP3
CLU_N
TPR_2
GSKIP_dom
TPR_1
TPR_MalT
TPR_7
Motif
Other DBs
NCBI-GeneID:
122007072
NCBI-ProteinID:
XP_042418769
LinkDB
All DBs
Position
7B:116032637..116058465
Genome browser
AA seq
1434 aa
AA seq
DB search
MAGKSNRGKNKGRALNSNSVKASETQLKPNESLTPSNNVSDSVRASHDDEHVLEELVSKS
IAVPESGGNGESTNSQTVATAKQAEGDIHLYPVQVKALSGEKLELQLSPGDSVMDVRQFL
LDAPETCFFTCYDLILHTRDGTSHYLEDYNEISEVADITSGGCSIEMVAALYDDRSIRSH
VGRARELLSLSSFQTSLSTHLALQHESTQQKTADAAKMESAEQDGLGFMEDNNDALSDLV
FSVPSKEIKCVESIVFSTFNPPPCYRRLVGDLIYMDVVSLEGNKYCITGTTRSFYVNSST
NILDPKPSKPAYEASTLVGLLQKISSKFKKGLREILDQKASAHPFEGVQSLLPPNTWLGS
FPIPEHKRDPARAEEALTLSFGSELIGMQRDWNEELQSCREFPHKTLQERILRGRALYKV
TCDFVDAAVKGAMGVINRCIPPINPTDPECFHMYVHNNIFFSFAVDSDLGHVTKSQEILK
FNSQTVAENSTNQTSCNSLTRTSDNKLVGATTNCNLVTSKSSDVEQNPGASDISTDASAE
AQISDSEQATHASANNDLKGTKAYQEADVSGLHNLAMAIVDYRGYRVVAQSIIPGILQGD
KSNSLVYGSVDNGKKISWNDSFHAKVVEAAKRLHLKEHSVLDGSGNAIKLAAPVECKGIV
GSDDRRYLLDLMRVTPRDANYIGPEYRFCVLRPELVASFCQVEAAERSSSSSGNTAQAAE
APDHPDTIRTDITVGTGDHLKEEECTLAPVSHSISPDEILLNPNVFTEFKLAGNQEEIVA
DEALVRKASTYLVDIVLPKFVEDLCSLDVSPMDGQTLADTLHAHGINIRYLGKVANMVKH
LPHLLDICSLEIIVRSTKHFLKDLLRESEDHDLGLAISHFFNCFIGNVLPVGSKGNLDNV
QLKVQKKGLDHHSKHKYMKGQMRWNHGDFSRKNQLAHALLTSEGLWSQIKEFAQFKYQFE
LPEDARIRVKKIAVIRNLCQKVGITIAARRCDFDAPSPFQASDILNLQTVVKHSVPSCSE
AKDLMESGKAKLAEGLLNEAYTLFSEAFSILQQVTGPLHRDVASCCRYLAMVLYHAGDMA
GAIVQQHKELIINERCLGLDHPDTAHSYGNMALFYHGLNQTELALRHMSRTLRILSLSSG
SDHPDVAATFINVAMMYQDIGNMKSALRYLQEALKKNERLLGPDHIQTAVCYHALAIAFN
CMGAYKLSIQHESKTHDILVKQLGEEDPRTRDSENWIKTFKLREQQVNAQKQKGQAVDPA
SALKAIDVLKANPELVQAFQAAAKSGNSSNLVNKSLNAAVIGEALPRGRGVDERAARAVA
EARKRAAARGILVRPSAAPMQPLPSLSQLVNIINSSTATDTPATVQPQSNEAEASQAQPN
EPKEAANGGPIQDSSTRSPNSNGSVSKDQAPVGLGTSLASQESKKQKHKSKSTV
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaagtccaacaggggtaagaacaagggccgagcactgaattctaattctgtc
aaggcatcagaaacacaactaaaaccaaatgagtccttgacaccctcgaacaatgtttct
gattcggtgagagcttctcatgatgatgaacacgtgctagaagagttagttagtaaatct
attgcagtacccgagagtggaggcaatggggaaagcacaaatagtcagacagtagcaaca
gccaaacaggctgaaggcgatattcatctctatcctgtccaggtcaaagcactttcaggt
gaaaaactggagttacagctaagccctggtgattctgtgatggatgtcagacaatttctt
cttgatgctcctgaaacttgtttctttacttgctatgatttgattctgcatactagagat
gggacatctcattatttagaagattacaatgaaatttctgaagttgcagacattacttct
ggcggttgctccatagagatggttgctgcattatatgatgatagatccattagatctcat
gtgggccgggccagagaattgctctctctttctagttttcaaacctctctgtcaacacat
ctggctttgcagcatgaaagcactcaacaaaaaactgcagatgctgcaaaaatggaatct
gcagagcaggatggattgggatttatggaggataacaatgatgctctttctgatttggtc
ttttcagtgccttctaaggagatcaaatgtgtcgagagcatagtgttttctacttttaat
ccacctccatgttacaggagattagttggagatctgatctatatggatgtagtgtcacta
gaaggaaacaaatattgtatcacaggaaccactagaagtttctatgtgaattctagcaca
aatattttggaccccaaaccatctaaacctgcttatgaggcaagcactttagttggtttg
ctgcaaaagatcagttccaagttcaagaaaggtcttcgtgaaattttggaccagaaagca
tctgctcatccttttgaaggtgttcaatcacttttgcccccaaatacatggctaggatcc
tttcctattccagagcataaaagagacccagcaagagcagaggaggctcttaccctttca
tttgggagtgaacttattggtatgcagagagattggaatgaagagttgcagtcatgtcgg
gagtttcctcataaaacactgcaagaaaggattctgcggggaagagcgctttataaggta
acttgtgattttgttgatgcagcagttaaaggtgcaatgggagtcatcaacagatgtatt
ccgcctattaacccaacagatcctgagtgtttccatatgtatgtgcataacaacattttc
tttagtttcgctgtggattctgaccttggacatgttaccaaaagtcaagagattcttaag
tttaactctcaaactgttgctgagaactccaccaatcaaacttcatgtaattctttgacg
aggacctctgataataagttggttggggctactacaaactgcaatttggtcacgtccaag
agctcagatgtggaacaaaacccaggtgcttcagatatttcaactgatgcatctgctgag
gcacagatcagtgatagtgagcaggccacacatgcttctgcaaataacgatcttaaagga
acaaaagcctaccaagaagcagatgtttctggacttcataatcttgcaatggctattgtt
gattacagaggctatcgagtggtagcacagagcatcattcctggtattcttcaaggtgac
aaatcaaattccctggtatatggttctgttgataatggaaagaagatatcctggaatgac
tcatttcatgccaaggttgttgaggcagccaagcgcctccacttgaaagaacactctgtt
ttagatggatctggaaatgccatcaaattagccgctccagttgaatgcaagggtatcgta
ggtagtgatgacaggcgctatcttttggatttaatgagagtcactcctcgtgatgcaaat
tacattggccccgagtatcgtttttgtgtcttgaggcctgaacttgttgcatcattttgt
caggttgaagctgcagagaggtcaagctctagttctggaaatacagcacaagctgcagaa
gcaccagatcacccagatacaattcgtactgatatcacagttggcacgggagatcactta
aaagaggaggaatgtacccttgcacctgttagtcatagtatttcacctgatgaaatactt
ctgaatccaaacgtgtttactgaatttaaactggcaggcaaccaagaggaaattgttgca
gatgaagcattggtcaggaaagctagtacttatcttgttgatatagttcttccaaagttt
gttgaagatctttgctcgcttgatgtctcaccaatggatggtcaaacattagccgacaca
ctccatgctcatggaattaatatacgttaccttggaaaagttgctaatatggttaagcat
ttgccacatctattggatatatgctctcttgagattatcgttaggtccacaaagcacttt
ctaaaggatttactaagggaatctgaagatcatgatcttgggctggctatttctcatttc
tttaattgtttcattgggaatgttttacctgttggctcaaaggggaatttggacaatgtg
caattgaaagtccaaaagaaaggactggatcatcactcgaagcacaagtatatgaaggga
caaatgaggtggaaccatggagatttttctaggaaaaaccaactggcacatgcactttta
acttctgaaggactatggtctcaaattaaagagtttgcacaatttaaatatcagtttgaa
ttaccagaagatgcaaggattcgagtgaaaaagattgcagttattcgtaatctgtgccaa
aaggtagggatcacaattgctgcaagaaggtgtgattttgatgctccatcaccctttcaa
gcctcagatattttgaatctccaaacagtggtaaagcattctgttccatcatgttcagaa
gcaaaggatctaatggaatctgggaaagcaaagttagctgagggactcctcaatgaggct
tatacgcttttttcagaagccttctctatacttcaacaagtgactggccctttgcaccga
gatgtcgctagctgctgtcggtatttggcaatggttttatatcatgctggcgatatggca
ggtgcaatcgtccaacagcacaaggaactgattataaatgagcgatgccttggtctagat
caccctgatactgcccatagctatggcaacatggcactcttttatcatggacttaaccag
acagaactcgccttgcgtcatatgtcccgaacgctgcgaatactaagtttatcatcgggg
tctgatcaccctgatgttgcagcaacattcataaatgttgctatgatgtaccaggatatt
gggaacatgaaatctgcactacggtatttgcaagaagcattgaaaaagaatgaacggctt
ctcggccctgatcatattcaaaccgcagtctgttatcatgctcttgcaattgcatttaac
tgtatgggtgcctacaaactttctattcagcatgaaagcaaaactcatgatatacttgtt
aagcaactcggagaggaagatcccaggacacgggattcagaaaattggataaagacattt
aaattacgtgagcagcaggtgaatgcacaaaagcaaaagggacaagctgtggatccagct
tctgccttaaaggctattgatgttttgaaggcaaatcctgagctggtacaagcattccaa
gctgcagctaaatctgggaattccagcaatttggtaaacaaatctctaaatgcagctgtg
attggtgaggcacttcctcgtggaagaggagttgatgagagagccgctcgagctgttgca
gaagcacgcaagagagctgcagccagaggcatcctcgtacgcccgagcgcggctcctatg
caaccattaccctcattgtcgcaacttgtgaacatcataaattcaagcactgctaccgat
acccctgctactgtccaaccgcaatcaaatgaagctgaagcaagccaagcacaaccaaat
gaacccaaggaggcagccaatggtggccccattcaagacagttccacgagatctcccaat
tcaaatggttcggtcagcaaggatcaagcgccagttggattggggacgtcgctggcctct
caagaatcaaagaaacaaaaacacaaatccaaatcaacagtatga
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