Zingiber officinale (ginger): 122007173
Help
Entry
122007173 CDS
T08725
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122007173
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zof03041
]
122007173
03032 DNA replication proteins [BR:
zof03032
]
122007173
Spliceosome [BR:
zof03041
]
Complex A
U1 snRNP components
Sm proteins
122007173
U2 snRNP components
122007173
Complex B
U1 snRNP components
122007173
U4/U6.U5 tri-snRNP components
122007173
Complex C
U2 snRNP components
122007173
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
122007173
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
EBNA2_Core
Gemin7
Motif
Other DBs
NCBI-GeneID:
122007173
NCBI-ProteinID:
XP_042418913
LinkDB
All DBs
Position
7B:complement(118068172..118070614)
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLTNETVSIELKNGTVVHGTIIGVDISMNTHLKTVKLTVKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEETPRVKPKKPTAGRALGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttttgatgaagctcaccaatgagactgtctcgatcgagctcaag
aatggcaccgttgttcatggcaccatcatcggtgtggatatcagcatgaacacccacttg
aagactgtgaaacttacagtgaagggaaaaaatcctgttacactcgatcacctcagtgtg
agaggcaacaatattaggtactacatcctacctgacagcctgaaccttgagactttactc
gtcgaggaaacgcctcgggtcaaacccaaaaaacccaccgctgggagggctctgggccgt
ggtcgtggccgagggcgtggtcgcggacgaggccgtggccgttag
DBGET
integrated database retrieval system
