KEGG   Zingiber officinale (ginger): 122007208
Entry
122007208         CDS       T08725                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122007208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122007208
   03400 DNA repair and recombination proteins [BR:zof03400]
    122007208
Spliceosome [BR:zof03041]
 Complex B
  Other components
   Prp19 complex
    122007208
 Complex C
   Prp19-CDC5 complex
    122007208
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    122007208
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect
Other DBs
NCBI-GeneID: 122007208
NCBI-ProteinID: XP_042418958
LinkDB
Position
7B:complement(118511318..118517678)
AA seq 1031 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIYNRHRKRKRKGIDYNLEIPFEKRPPPGFFDVSGEDRSAEQPKYPT
TIEELEGRRRADVEAQLRKQDIAKNKIAQRQDTPAAILQANKLNDPEAVRKRSKLMLPAP
QILDQELEEIAKMGYASDLLLANEELAEGSSATRALLANYSQTPRLGITPLRTPQRTPGG
KGDAVMMEAENLARLRESQTPLLGGENPVLHPSDFSGVTPRKREIQTPNPMATPSATPSA
TPGPGVTPRFGMTPRDGYSFSMTPKGTPFRDELHINEDLDVRDTSKLELHQQAELKRNLR
YGLTNLPQAKDEYQIGIQPIPEETEEAEEKIEEDMSDRIARERAQEQARLEALLRKRSKV
LQRELPRPPAASLEIIKKSLMRGDEDRSSFVPPTPFEQADEMINRELLALLEHDNAKYPI
SEKSDEKKKKGTKRMSNGKLSVVPELEDFEEDQLKEADSLIKEEIQFLRLAMGHESESFD
DFVKARDACQEDLMFFPARSTFGLASVAGNSEKLASLQNEFDMVKKRVDEEAKRATRLEQ
KIKVLTHGYQTRAEKLWSQTEATFKQMDTAATELECFKVLQKQELLASTLRVNSLVEEVN
KQKTLEESLQSRYAGLLAEHDRVKRLLEEHKMRLQLEEENAARARALEEEARLLEEHKMR
LQLEEENAARARALEEEAARNRALEEDKATDIDVMDELPDKKDQLNADITEAGTSVEVSA
PPTETSQLTVETIAETDSMRDNEQAPANNYLEVTGGASQVIIEENDNEQAPANNYLEVTG
EISQVIEEKMMDDVGVENTIDVPLLSNSTGTEVVTNSDENDQTMQDVNDQKAVSALVAMD
GGGTGDSAVSE
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggtggcgtgtggaagaacactgaggatgagatcctgaaagct
gcggttatgaagtatgggaagaatcagtgggctaggatatcttccctccttgttcgtaag
tctgccaagcaatgcaaggctagatggtatgagtggctcgatccatctatcaagaagaca
gagtggacaagggaagaggatgagaaactgcttcatcttgccaagctcatgcctactcaa
tggagaacaattgctccaattgtgggtcgaacaccatcccagtgtcttgaacgctatgaa
aagctacttgatgcagcttgtgcaaaagacgagaactatgaaccaggtgatgacccacga
aaattgcgcccaggagagatagacccaaaccctgagtcaaaacctgcacgacctgatcct
gtggatatggatgaggatgaaaaggaaatgctttcagaagcacgtgctcggttagctaat
actagaggcaagaaggccaaaagaaaggcaagggagaaacagcttgaggaggcaaggagg
cttgcatctttgcagaaaagaagagaactgaaggcagctggaatttataacaggcatagg
aagagaaaaaggaaaggaattgactataatttagaaataccctttgagaagagacctccc
ccaggattctttgatgtttcaggtgaagataggtcagcagagcaacccaaatatccaacc
accatcgaggagcttgaaggaagaaggagagctgatgttgaagcacagttaaggaaacaa
gatattgctaaaaacaagatagcacaaagacaggatacccctgctgcaattttgcaagcc
aacaaacttaatgatccagaagcagttaggaaaaggtctaaactgatgcttccagcacca
caaattttggatcaggagttggaggaaattgcaaaaatgggttatgcaagtgatcttttg
ttagccaatgaggaacttgctgaaggtagtagtgctacgcgagcactccttgcaaattat
tctcagactccaagactaggaatcacacccttgcgcaccccacagagaacacctggtgga
aaaggtgatgcagttatgatggaagctgaaaatcttgcaagactgagagagtctcagaca
ccacttttgggtggggagaatcctgtgttgcatccgtccgatttctctggtgtcacacca
aggaaaagggaaattcagactccaaatccaatggctactccatcagccactccatcagct
actcctgggcctggtgttacccccagatttggcatgactcctagagatggatattctttt
agtatgacaccaaaggggacaccattcagggatgaacttcacataaatgaagaccttgat
gtgcgagatacttctaaacttgagcttcatcagcaggctgaattgaaaagaaatttacgt
tatgggctaaccaacctgccacaagctaaggacgagtatcagataggaattcaacccatt
cctgaggagactgaagaggctgaggagaaaattgaagaggacatgtctgacagaatagcc
agggagagggcacaggaacaggcaaggctggaggccttactcaggaagagatctaaagta
cttcagagagaacttcctagaccacctgctgcttctctagagattattaagaagtcgctt
atgaggggggatgaggacaggagctcctttgtccctcctactccatttgagcaggctgat
gaaatgataaatagagaacttcttgctttattagaacatgacaatgctaagtatccaatc
tctgagaaatcagatgagaagaaaaagaaagggaccaaacgaatgtcaaatggtaaatta
tctgtagttcctgaactcgaagattttgaggaagatcagctgaaggaggctgattctttg
ataaaggaagaaattcagttcctccgtttggcaatgggtcatgagagtgaatcttttgat
gattttgtcaaagcccgagatgcatgccaagaagatctcatgttctttcctgctcgtagc
acctttggtcttgcaagtgttgctggtaacagtgagaaacttgcttccttgcaaaatgaa
tttgacatggtgaagaaaagagtggatgaagaagcgaagcgagccacacgtctcgaacag
aaaattaaagttctcacgcatggataccagacaagggccgaaaagttgtggtctcagacc
gaagctacattcaagcaaatggacactgctgcaacagaactggagtgctttaaagtctta
caaaagcaggagctactggcatccaccttaagagttaacagtttagtcgaagaagtcaac
aagcaaaaaacactggaagaaagtttgcaaagtagatatgctggtctattagctgagcat
gatcgagtaaaaaggttattggaggaacacaaaatgcgactgcagcttgaagaagaaaat
gctgctagggctcgagctcttgaggaagaagcaaggttattggaggaacacaaaatgcga
ctgcagcttgaagaagaaaatgctgctagggctcgagctctcgaggaagaagctgctagg
aaccgtgctcttgaagaagacaaggcaacagatattgatgttatggatgaactgccagac
aagaaagatcagctcaatgctgatattactgaagccggcacttccgttgaggtgtctgct
cctcctaccgaaacaagccaattgactgtggaaacaatagcagaaacggatagtatgcgc
gataatgagcaggcacctgccaacaactacttggaggtcactggaggagcatctcaagtc
ataattgaagagaacgataatgagcaggcacctgccaacaattacttggaggtcactgga
gaaatatctcaagtcattgaagagaaaatgatggacgatgttggtgttgaaaacacaatt
gatgttcctcttctttctaattccacgggcacggaagttgtaacaaattcagatgaaaat
gatcagaccatgcaagatgtcaatgatcagaaagctgtttcagctctggttgctatggat
ggtggtggcacaggggattcagccgtctcagagtga

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