Zingiber officinale (ginger): 122007214
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Entry
122007214 CDS
T08725
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 23-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zof01002
]
122007214
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122007214
Enzymes [BR:
zof01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122007214
Peptidases and inhibitors [BR:
zof01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122007214
Ubiquitin system [BR:
zof04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122007214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122007214
NCBI-ProteinID:
XP_042418964
LinkDB
All DBs
Position
7B:complement(118592294..118600645)
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AA seq
912 aa
AA seq
DB search
MAEGTPLPTNLQERAAISVTAQVEALFHRRIEFHPNRKPLSSFPNGDFRLETLNPSSGPD
TSAQKIGGASMPSKGSRSVESEFYEFGFDQELSCRITFRRIGAGLANLGNTCFLNSVLQC
LTYTEPFAAYLQSGKHKSSCNTAGFCAMCALQNHVITALQSSGKIVSPSHLVKNLRCVSR
SFRNSRQEDAHEYMVNLLESMHKCCLPSGVPSESPSAYEKSLVHKIFGGRLQSQVKCMQC
NYSSNKFDPFLDLSLEIVKADSLLKALAHYTKVEQLDGGQKQYQCQNCKEKVRALKQLTI
YKAPHVLTIHLKRFYSHDPGQKIDKKVEFEPSLDLKPFVSDQQGGNLKYTLYGVLVHAGW
STRSGHYYCYVRTSSGLWHSLDDNQVRQVSEKTVLAQKAYMLFYVRNRSSIPKGFENSFH
KDRANQNGKKLIPQSSLVLNGVVQNGLTEKYHSPMEPTSSQLQISGAVAHSASAMNVSSN
ELSTQTLSPLLNGGTSENKIPELETNNQVLGVKHSTLKDGSSIKKGLQQTTSSAPFSKSS
VKLPVEKVLKEVYEVLDSEKDLFQVAVENSISDLPQDVDGEDERSHASCRPLECAHQNGH
SSNLQSEDDNAKQENLAASVKMLKKLHNPMKLRRLAKYAQKGLPFGRHHSFLASLNLSVI
QRSKKNKKFHLRLKDSQKHECVCQKDQALSTSGAVNNVSAGKGSSSKHSRSEMIKGSIDQ
AMKIRDYCNESFDHADKKEEVTEKDETLSPELPISSSDSTIKSLNSRLTVENEEVNGKDV
IFAPQLPIISSNPTEKSVNSRITFAGDQVRLQKDFTNMLMMGLEISVPRWDDAKLHKLGQ
NGLESSRSTSIGYVLDEWNEEYDRGKRKKLRKSLQSFDGPNLFQQTANQKARQNFKAKFE
TEQSANQPFRIC
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggacgcccttgccgaccaatttgcaggaaagggcggccatctccgtcacg
gctcaggtggaagccttgttccataggaggattgagttccatcccaatcggaagccgtta
tcttccttccccaacggggatttccgccttgagactctgaaccccagctcgggtcccgat
acatctgcacagaaaataggaggagcctccatgccatcgaaggggagtcgatcggtggag
tcggagttttacgagtttggattcgatcaagagcttagctgtagaatcaccttccggagg
ataggtgctggtctggcaaatcttggcaatacttgttttcttaattcggttcttcagtgc
cttacatatactgagccttttgcagcttatttgcaaagtggaaagcataaatcttcttgt
aatactgctggattttgtgcaatgtgtgcccttcagaatcatgtcattactgctttacag
tcaagtggaaagatagtttcaccttcacatcttgttaagaacttacgttgtgtatcacgc
agtttccgaaattcaagacaagaagatgctcatgagtatatggttaacttgctagaatca
atgcataaatgctgtttaccatctggagtaccaagtgagtcccccagtgcctatgaaaaa
agcttggtacacaagatatttggtggccgattgcagagtcaggttaaatgcatgcagtgt
aactactcttctaataagtttgatcccttcttagacttgagtcttgaaatagtgaaggct
gactctttgctgaaggcacttgcccattacaccaaggtggagcaattagatggaggtcag
aagcaataccagtgccaaaactgcaaggagaaagtcagggccctcaagcaacttaccatt
tacaaggctccccatgttcttaccattcatctcaagcgtttttattctcatgatcctggt
caaaagattgacaaaaaggtggaatttgaaccaagtttggatttaaaaccttttgtcagc
gatcaacagggtggaaatctaaaatatacactttatggtgtattagtacatgcagggtgg
agtacccgctctggacactattattgttatgttcgtacctcaagtggcttgtggcattct
ctggatgataatcaggtacgccaggtaagtgagaagactgttttggcacagaaagcatat
atgttattttatgtacggaacagaagttctatacccaagggatttgaaaattcgttccac
aaagacagggctaatcaaaatggaaagaaattgattccccagtcatccttggttttgaat
ggtgttgttcaaaatggtttgacagaaaaataccatagtcctatggaacccacctcttcc
caattgcaaatttcaggtgctgttgctcattctgcttcggctatgaatgtttcatcaaac
gaactttcaacacaaacactgtctcccttgctgaatggtggcacttctgaaaataaaatt
cctgaactagaaactaataaccaggtacttggagtgaaacattccactttgaaagacgga
agctccattaagaaaggattgcagcaaacaacatcatctgcaccattttctaaaagttca
gtgaagcttcctgttgaaaaggttttgaaggaggtatatgaagttttggattcagagaag
gatctgttccaagttgctgttgaaaatagcatctctgatctaccccaggatgtcgatggt
gaagatgaaagatctcatgcttcttgtcgtccactcgaatgtgcacatcaaaatggacac
tcatctaatctgcaatctgaagatgacaatgctaaacaggaaaatcttgctgcttcagta
aaaatgttgaagaaactgcataatcccatgaaactgaggaggcttgctaaatatgcccag
aagggcctgccatttggtcgccatcattcatttcttgcttctttaaacctgtcagtgatc
caaagatccaagaaaaacaaaaaattccatttaagattaaaagattcacagaaacatgag
tgtgtctgtcaaaaagaccaggctttgtccacgtctggggctgttaataatgtttctgca
ggtaagggttcttcatcaaaacattctcgatctgaaatgatcaaaggaagtattgaccaa
gctatgaagatcagggactactgcaatgaatcatttgatcatgcagacaaaaaggaagag
gttactgaaaaagatgagactctttcccctgagttgccaatatctagctcagattccacc
ataaaatcacttaattcaaggctcactgttgaaaatgaagaggtgaatgggaaagatgtg
atatttgcccctcagttgccaataattagctcaaatcccaccgaaaaatcagttaactcg
agaatcacctttgctggtgaccaagtaagattgcagaaagattttacgaatatgcttatg
atggggttggagatttctgttcctagatgggatgatgctaaattgcataaattagggcag
aatggtttagaaagttcgagaagtaccagtattggctatgtattagatgaatggaatgag
gaatacgatcgtggcaaacgaaagaagttaagaaaatccctacagtcttttgacggaccg
aacctattccaacagactgccaaccaaaaagcacgacagaatttcaaggcaaagtttgaa
actgagcaatcagcgaaccaaccgttcaggatatgttga
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