Zingiber officinale (ginger): 122007218
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Entry
122007218 CDS
T08725
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00730
Thiamine metabolism
zof00900
Terpenoid backbone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
122007218
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122007218
Enzymes [BR:
zof01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
122007218
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Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Transketolase_C_1
Peripla_BP_4
Motif
Other DBs
NCBI-GeneID:
122007218
NCBI-ProteinID:
XP_042418967
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All DBs
Position
7B:complement(118635721..118643005)
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AA seq
745 aa
AA seq
DB search
MLAALLHARRSEIHVISSCLFANSRCLVRQMASSSWQCLFGHRSFFHGESRFLSKSELFR
TMQFFKRNTSEFVAHENSFAAHPQKSLCSQVGALPDLCDFFWEKDPTPILDMIDTPVHLK
NLSHKELKQLATEIRSEISFIMSNARRPYKASLSVVELTVAIHYVFHAPMDKILWDDGEQ
TNAHKILTGRRSLMHTLKQKKGLSGFTSRAESDYDAFGAGHGCNSISAGLGMAVARDIQG
KKNRVVAIINNWTTMAGQVYEAMSNAGYLDSNMIVILNDSRHSLHPKLDDGSKMAISPLS
SSLSKLQSSRSFRRFREAAKGITKRIGKAVHELAAKVDEYARGMIGPPGATLFEELGLYY
IGPVNGHNIDDLVCVLNEVALLDSTGPVLVHVITEDEKGLESTDEGTSKSCPLVSDSKSM
KSSLRTFNDVLVETLVAEAERDKSIVVVHTGIAVDPSLKLFQSRFPDRIFDIGMAEQHAI
TFSAGLSCGGMKPFCIIPSTFLQRGYDQVIEDVDLQKVPVRFAISNAGLVGSEGPTQSGI
FDITFMACLPNMIVMAPSDEDELIDMVATAVRINDRPICFRYPRIALLGNGSSLHNGIPI
EIGKGEILVEGKHVALLGYGVMVQNCLKARSLLASLGIEVTVASARFCKPLDIELIRELC
QDHEFLITVEEGTVGGFGAHVSQFLALDGLLDGRVKWRPVLLPDNYIEHASPREQLDIAG
LTGHHIAATALSLLGRFREAFSLMR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgcccttctccatgctcgccgcagtgagatccatgtgatttcgagttgttta
tttgcaaattctaggtgtcttgttcgtcaaatggcgtcttcctcctggcagtgcttattt
gggcataggtcattcttccatggtgagtccaggttcctgtccaaatctgaactcttcaga
actatgcagttttttaagaggaacacatcagagttcgttgctcacgaaaattcttttgct
gcacatccccagaagagtttgtgcagccaagtaggtgcactaccagatctttgtgatttt
ttttgggaaaaggatccaactcctatattagacatgattgatacaccagttcatttgaag
aatctgtctcacaaagaattaaaacaattggccactgaaattcgttctgagatatctttc
attatgtcaaatgctcgtagaccttataaagcaagtctttctgtggtagagttgacagtg
gcgatacattatgttttccatgcaccgatggacaagatactttgggatgatggtgaacag
acaaatgcacataagattctgactgggaggcgctctcttatgcatactcttaagcaaaaa
aaaggtctctcaggtttcacttctcgagcagagagtgactatgatgcatttggagctggg
catggatgcaatagcatatctgccggacttggcatggcagttgcaagagatattcaagga
aagaagaatcgtgttgtggcaattataaataattggacaacaatggctggtcaggtctat
gaggcaatgagcaatgctggatatcttgattctaacatgatagtgattttaaacgatagt
aggcattctttacatccgaagcttgatgatggatcaaaaatggcaatcagtccgctctcc
agtagtctaagcaagctccaatctagtagatctttccggagattcagggaagctgcaaag
ggaataacaaaaagaattggtaaagccgtgcatgaattggcagccaaagtagatgagtac
gcacgtggtatgattggtcctcctggagctactctctttgaagagcttggattgtactac
attggaccagttaacgggcacaatattgatgatctagtttgtgtacttaatgaagtggca
ttattagattcaactggtcctgttttagtacatgtcatcacagaggacgagaagggcttg
gaatctactgatgaagggacctcaaaatcatgccctttagtatcagattcgaagtccatg
aaaagcagcctcaggacgttcaatgatgttcttgtggaaactctagtagcagaagcagaa
agggacaaatcaattgtggtagtccatactggcattgcagttgatccatctcttaagctt
ttccagtccagatttccagatagaatctttgatataggaatggcagaacaacatgctatt
actttttcagcaggattatcttgtggaggcatgaaaccattctgcataattccatcaaca
ttcttacaaagaggatatgatcaggtcattgaagatgtggatctgcagaaagttcctgta
agatttgccatcagtaatgctgggcttgttggatctgaaggtcctactcaatcaggaatt
tttgatattacattcatggcatgcttgccaaatatgattgtcatggcaccatcagacgaa
gatgaactcattgacatggtagctactgctgttcgtatcaatgataggcctatctgcttc
cgatatcctagaattgcccttttgggaaatggtagttcattacataacgggattcctatt
gagatagggaagggagagatcctagtggaaggaaagcatgtggctcttcttggctatggt
gtgatggttcagaattgcctgaaggcccgatctttgcttgctagtctcggtattgaggta
actgttgctagcgccaggttttgcaagccacttgacattgagctcatccgagagctatgt
caggaccatgagtttttgataacagttgaggaaggaactgtcggcggctttggcgctcat
gtttctcaattcctggctcttgatggcttgcttgatggaagagtgaagtggcggcccgtg
ttgctaccggataattacatcgagcatgcatccccaagggagcaactagatattgctgga
ttgactggacatcacattgcagcaacagcattaagtctgctagggcgttttcgcgaagcc
ttcagcttgatgcggtag
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