Zingiber officinale (ginger): 122007224
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Entry
122007224 CDS
T08725
Name
(RefSeq) RAN GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122007224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122007224
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122007224
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_4
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122007224
NCBI-ProteinID:
XP_042418973
LinkDB
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Position
7B:118732885..118736597
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AA seq
541 aa
AA seq
DB search
METAQEFQRTFSIKLWPPSANTRAMLVDKMTKNLSSETFLSRKYGLLSKEEAYENAKRIE
DECFLAANEHFHNEPDGDGSSAVQFYAKQTSKLMLEVLKTGPRSKEDVEATAVGGIAKPV
ETLFDISGGKRAFIEVEEVRELFRPLTVQGNSYSKICLSNRSFSIDAARVAAPILTSLKE
QLTEVNLSDFVAGRPEDEALEVMKIFSSALEGTALRYLNLSDNALGEKGVRAFGALLKSQ
NCLEELYLMNDGISEEAAKAVCELIPSTDKLTTLHFHNNMTGDEGGIAISELLKCSPLLE
DFRCSSTRVGAEGGIELAKALETCTHLRKIDLRDNIFGVDAGIALSKALEKLVHVTEIYL
SYLNLEDEGSIAIVNALNNFAPSLQVLDIGGNDVTLKAASALVDCITAKESLRKLFLSEN
ELKDQGAIVIGKALEDDHVQLEELDMSSNMIRRAGARCLAQAVSNKPDFKRLNINGNFIP
DEGIDEVREILKNGKNSEDVLGPLDDNDPEGEDEGEEDGDAEEEDQGELESKLHHLKVDK
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgctcaagagtttcaacgcacattctccattaaattatggcctcccagtgca
aacaccagagcaatgcttgtggacaagatgacgaagaacctctcctcggaaacattcctc
tccaggaagtacggtctgttgagtaaagaagaggcctatgagaatgccaaacgcattgaa
gacgaatgcttccttgctgcaaatgaacattttcacaatgagcctgacggcgatggaagc
tctgcagttcagttctatgcgaagcaaactagcaagctaatgttagaagttcttaaaaca
ggccctagatccaaagaagatgtagaagccactgcggttggtgggatcgcaaaacctgtt
gagactctgtttgacatttccggtgggaaaagggcatttatagaggtggaagaggtcagg
gagcttttcaggccgctaactgtgcaaggaaactcatacagcaaaatttgcttaagcaat
cgaagcttcagtatcgatgcagctcgcgttgcagcgcctattctgacatctcttaaagag
cagctgacagaagtaaacctgtcagattttgttgctggaagaccagaggatgaagctctc
gaagtcatgaagatattctcctcggctctggaaggcactgctcttcgatatctcaacctc
tctgacaatgccttaggcgagaagggtgttcgagcattcggggcacttttaaaatcacaa
aactgcttggaggagctttacttgatgaatgatggaatctctgaggaagctgcaaaggct
gtgtgtgagttaattccttcaaccgacaagcttacaacgctccatttccacaacaatatg
actggtgatgagggtgggatagctatttctgaacttcttaaatgttctccattgttggag
gatttcagatgctcgtcgacaagggtgggcgctgagggtggaatcgagttggccaaggca
ttggagacttgcactcatttaaggaagattgatctccgtgataatatttttggtgttgac
gcagggatagcccttagcaaggcactcgaaaagcttgttcatgtaacagaaatctacctt
agctatctcaacttggaggacgaagggtctattgccattgtgaatgcgctgaataatttc
gcgccttctttgcaagtcttggacatcggcgggaatgatgtcactttaaaagctgcctca
gcattagtcgattgcatcactgccaaggaatcactcaggaaactcttcttgtccgagaac
gaactgaaggaccagggtgcaattgtcatcggcaaagcattggaagatgatcatgttcaa
cttgaggaacttgacatgagtagcaacatgataaggagggcaggggctagatgcttggcg
caagcagtgtcaaataagccagacttcaagcggctgaacataaacggaaattttatccca
gatgagggcatcgacgaggttagggaaatattaaagaacggtaaaaactctgaggatgtg
cttgggccattggacgataatgatcccgaaggtgaggacgaaggggaagaggatggtgat
gctgaagaggaggatcaaggcgaattggagtctaaactccatcatctcaaagtagacaag
gattag
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