Zingiber officinale (ginger): 122007333
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Entry
122007333 CDS
T08725
Name
(RefSeq) VAMP-like protein YKT61 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122007333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122007333
Membrane trafficking [BR:
zof04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
122007333
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
122007333
NCBI-ProteinID:
XP_042419120
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Position
7B:complement(120147216..120151067)
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AA seq
227 aa
AA seq
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MKITALLVLKTSGAGDTSSSSSSGASDPVVLANASDVSHFGYFQRSAAKEFILFVSRTVA
KRTTPGQRQSVQHEEYKVHSYNRNGLCALAFMDDHYPVRSAFSLLNTLLCGSAVNVPVFL
PFLNHVLDEYQKTFGESWRVQQTDSTQPWSFLTEALTKFQDPAEADKLLKIQRDLDETKI
ILHKTIDSVLARGERLDSLVEKSSDLSAASQMFYKQAKKTNQCCTML
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactgccctcctcgtcctaaaaacctccggcgccggcgatacctcctcatct
tcttcttctggagcatcggatcccgtggtcctcgccaacgcctccgacgtcagccatttc
ggatacttccagaggtcggccgccaaggagttcatcctctttgtctcccgcaccgtcgcc
aagcgaacaacccccgggcaacgccagtccgtgcagcacgaagagtacaaggtgcactct
tataaccgaaatggcctttgcgctttggctttcatggatgatcattatccagttcgaagt
gcattttctcttctaaacacgctgttatgtggttccgcagtcaatgttcctgtcttcctt
cccttcttgaatcacgtactggatgaatatcagaagacctttggcgagtcttggagagtc
cagcaaactgattctactcaaccatggtcatttctaactgaagcattgacaaaattccag
gatcctgcagaggctgataagttactgaaaattcagagggaccttgatgaaactaagatt
atccttcataaaactattgatagtgtgctcgctcgaggagaaaggttagatagcctggtt
gagaagagttcagatctcagcgcagcatcacaaatgttctacaaacaagccaagaaaacc
aaccaatgctgcaccatgctgtga
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