Zingiber officinale (ginger): 122007363
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Entry
122007363 CDS
T08725
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122007363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122007363
03036 Chromosome and associated proteins [BR:
zof03036
]
122007363
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122007363
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122007363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
122007363
NCBI-ProteinID:
XP_042419160
LinkDB
All DBs
Position
7B:120658536..120666394
Genome browser
AA seq
1027 aa
AA seq
DB search
MFGSSNTFSQSSTSPFGSQPMFGQTSSTATNPFAPKLFGSPNSFGTQNGSSIFGGTSTGV
FGQPSTPAFGASPAPAFGSSMPAFGASSTPAFSSGSSSFGGSSLFGQKPAFGTFGSSPNQ
SSPFGSTFQPTQPAFGTSLFGSTTPFSQSSQSAFGATTTPTFGSTSTPSFGTATTPAFGA
TTTPAFGATSTPAFGSTTTPAFGSTTSSLFGSAGTSFGVSSSPAFGTTAAPSFGTQTTSV
FGSSSTPAFGASSAPTFGSPTVSAFGTSNTPFSFSSTPAFGQSTSAFGSTPFGASTSPFG
AQGSPFGAQATTPSLGSPGFGQSAFGTQPGGTRVASYSPTPEADGGTSSQPAGKLESISA
MSVYKEKSHEELRWEDYQRGDKGGSNQSGQPAGAINFSAPSQPSPYVSTGTAVQSAANPF
SSTTPANPFALKSPSFGSSGFGSTSTSLFNSPFSASSSSPFGPTSTTSLFGASSSSTFGS
SSSPSLFGGSSAPAFGSSTSVFGNSLAGSSLAFGSGLGSTQASGLFQSSPAPFGQTSTPF
AQPTSGTTTAFGSNLFSTPSTGFGGSLFSSSTPSLFPSSTPAGFNATPAAQTPFQSAPAV
QPSNAFSFSNFGQIQPASSSGFGAMPNLFNQSTIGQPAAGQSNVVTQPVPVANPFGMLPA
MPHMSIGRVGSTPSIQYGISSMPVVDKPIPARNSLLLVPRISSQRRIRLPPRKYSPKTDG
PKLPFFADDETLSTPKADALFIPRENPRALVIRPVEEWPPRSIMEKGSIVKDRPNSANEN
GKVPGEPSAPAYKELDEGDNDEPVTEHGHSKDPTGQTASPSKPMHKANGGINGDHMQKAA
DSYMKISGHRAGKAAITYEHGPGIEALMPKLRRDDYYTIPRIQELAAKERAEPGFCRHVK
DFVVGRHGYGSIKFYGETDVRALDLELIVQFNHREVIVYSDDDKKPPVGQGLNKPAEVTL
LDIKCIDKKTGEQLTEGPRVERYKEMLTRKVEEQGAEFIAYDPVKAEWKFKVKHFSRYRF
LDVDLIP
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgttcggttccagcaatactttcagtcaatcttcaactagtccgtttggttcacagcca
atgtttgggcaaacaagtagtactgctactaatccttttgcgcccaaactctttggaagc
ccaaattcgtttggtacccagaatgggagttcgatttttggaggcacgtctactggggtc
tttggacaaccatcaacacctgcctttggtgcttcaccagctccggcttttgggagctca
atgcctgcctttggtgcatcatcaactcctgcttttagcagtggttcctcttcatttggt
ggctcttctttgtttggacagaagccagcttttgggacttttggttcatctccaaaccaa
tcaagtccatttggcagtacatttcagccaacacaaccagcatttgggaccagcctcttt
ggttccacaaccccattcagtcaatccagtcaatctgcatttggtgctactactacccca
acttttggctctacaagcaccccatcttttggtacagctactacaccagcatttggtgcc
acgactacaccagcatttggtgccacaagcacacctgcatttggttctacgacaacccca
gcatttggttcaacgacatcatccctctttggttctgcaggaacttcatttggggtttca
agttctccagcatttggtacaacagcagcaccatctttcggtactcaaaccacctctgtc
tttgggtcttcaagtacgccagcatttggtgcatctagtgctccaacattcggctcgccg
actgtttctgcttttggcacatcaaatacccctttcagttttagttccaccccagccttt
ggccagtcaacatctgcatttggcagtacaccttttggagcatcaacatctccttttggc
gctcagggctccccatttggtgctcaggcaacaacaccatcccttggtagcccaggtttt
ggacaatcagcttttgggactcagcccggaggaacaagagttgcatcatatagcccaaca
cctgaggctgatggtggtactagtagtcagcctgctggcaagctggaatctataagtgca
atgtctgtgtataaagaaaagagtcatgaggaattaagatgggaggattatcaacgaggt
gataaagggggatccaaccagtctggacagcctgcaggagcaataaatttttccgcacca
tctcaacccagcccttatgtttctacaggcactgctgttcaatctgctgcaaaccctttt
tcttcgaccactcctgcgaatccctttgctcttaaatctcctagttttggttcatctggg
tttggttctacttctacatcacttttcaactcaccattctctgcttcctcatcgagtcca
tttggtccaacttctacaacttctttgtttggtgcttctagtagttctacatttggttca
agttcatcaccctcactttttggtggatcaagtgcacctgcttttggctcttcaacatca
gtctttggcaattcattggccgggtctagtttggcttttggatctggccttggcagtact
caagcttctgggctattccagtcctcacctgctccttttgggcaaacatcaacacctttt
gcacagccaactagcggaacaactactgcctttggatcaaatctatttagcactccatct
actggttttggtgggagtttattcagcagttcaacgccatcactctttccttcaagcact
ccagctggatttaatgcaactcctgcagcacagacacccttccaatcagctccagcagtc
cagccatccaatgcattctcattttcaaattttggacagatacaaccagcctcttctagt
ggctttggtgctatgccaaacctcttcaatcaaagcaccattggacagcctgctgctggt
cagtccaatgtggtcacgcaaccagttcctgtcgcaaatccttttgggatgcttcctgca
atgcctcatatgtcaattggtcgtgtgggctctaccccctcaattcagtatggaatttcg
agcatgcctgttgttgataagcctattcctgcaaggaattcactgttactagttccacga
atttcctctcagagaaggattagactgcctcccaggaaatactcccctaaaactgatggc
ccaaagttgccctttttcgctgatgatgaaacactttccacaccaaaagcagatgcactt
ttcattcccagagaaaatcctagggctctggttatacgcccagttgaggaatggcctcct
cgaagtattatggaaaagggtagtattgtcaaagatagaccaaactcagccaatgaaaat
ggtaaagtgccaggagagccttctgctccagcttataaggaacttgatgaaggtgataat
gatgaacctgttactgagcatggacactccaaggatcccactggtcaaactgcatcaccc
tctaaacctatgcacaaggcgaatggtggcatcaatggtgatcatatgcaaaaagccgca
gattcttacatgaaaatatctggacacagggcaggcaaggctgcaatcacgtatgagcat
ggtccaggcatagaagcactgatgcctaaactccgccgagacgattactatactatccct
cgaatccaggaactggctgcaaaagagcgtgcagagccaggcttctgccggcatgtcaag
gattttgttgttggtcggcatggctatggcagcatcaagttctatggagaaaccgatgtc
cgggcactcgacctggagttgattgtccaattcaaccaccgcgaggtgattgtttacagc
gatgatgataagaagcctcctgttgggcaagggctgaacaaacctgcagaggtgacactc
ctcgacataaaatgcatcgacaagaagacaggcgagcagttgacagagggtccgagagtg
gagaggtacaaggagatgctgacacggaaggtggaggagcaaggggcggaattcatcgct
tatgatcctgtcaaggcggagtggaaattcaaggtgaagcacttcagccggtacaggttt
ctcgacgtggatctgattccttga
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integrated database retrieval system
