Zingiber officinale (ginger): 122007856
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Entry
122007856 CDS
T08725
Name
(RefSeq) pumilio homolog 5-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
zof
Zingiber officinale (ginger)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NABP
DUF445
Motif
Other DBs
NCBI-GeneID:
122007856
NCBI-ProteinID:
XP_042419317
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Position
8A:20356952..20369995
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AA seq
1044 aa
AA seq
DB search
MATESPLRFVGNSGAGSWLLCKDTPGIASTSTLSEELGLLLKGQKYNGTKSNTGLSRSGS
APPSMEGSSVTFDILQTLTDRFDVNLDSLQNCKSEEELRAHPGYLAYYCKNVNLNPRLPS
PLISRENRHLMQQIGSIGNNEKLISFNDNSNSIFSVSQHALSTHNEEPEDDRSPRMSPLQ
RRHMNPIDLVEEDLFETQCPVYNNHSQHPNHSKTERAVSQDSLSHPLHNSSTDLANPEKI
IPRIGTDGCTYLDLQSGGLLLNDDLGTMPGHLASIEKSVNLQSSQYESSNRSTTLGDGVS
TTGGICSDPGDIENEVRKLKLSAHNLKNHQLCQNPQQVGMPSRGSSSHSLGNESQIIAEG
ISHSQGMGFSLSHGHPGQPKLTSADMQSSLQSASFAPSLYITGSGFGTPYYHNFQFPGLP
PQFSINGCTLNPSVVPQLINVYPHPHSSIPVPFDNPVGSNFTARASESPSGGGIVSGVDM
HYKNYEQLTVQPHFPDPLYVPFCQHPSVDAFQTPGQYDPMICTVGAIGIIPGNCDAQKIS
GYPPHLIDHRPQIPRISASTPDSTKGIPFSPSYYGSPASIDVMQLPSSPLASHVFIGSQL
PSSPLASPVFIGSPVAGAGFSGRKNENIKFPFGSEKNTTASGWKSQRGCEKVDDPLHSFL
EELKSNKARRYELSDISGRIVEFSSDQHGSRFIQQKLENCSIQDKASVFKEILPHASSLM
TDVFGNYVIQKVYAGVLHNLHLLVSDHKFVIILPRASSLMTDVFGNYVIQKFFEHGTPEQ
RNELAYKLVCNVLPLSLQMYGCRVIQKALEVIELDLKTQLVQELDGHVMKCVRDQNGNHV
IQKCIECVPTEKITFIISAFHGQVATLSTHPYGCRVIQRVLEHCTDESQSRCIVDEILQS
VCQLAQDQYGNYVTQHVLEKGKPHERSQIISKLSGKILQMCQHKFASNVVEKCIKYGNAE
ERDHLIKEIIGETEDSDNLLVMMKDQFGNYVIQKILDSCTDKQREILVNRIKVHLQSLKK
YTYGKHIVARVEQLCADAPESPES
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggccacggagagtccattgagatttgttgggaatagtggagctggaagttggctcctg
tgtaaggatacaccaggaattgcttcaactagtactttatcagaagagttgggattactt
ttgaaagggcagaaatacaatggaacaaaaagtaacactggcctcagccgaagtggaagt
gcacctcctagcatggaaggttctagtgtaacattcgatatcttgcaaactctgactgat
cgctttgacgtcaacttggatagtcttcaaaattgcaaatctgaagaagaactccgagct
catccaggttacttagcatattactgcaaaaatgtgaatttaaatccaaggcttccgtca
cctcttatatctcgggagaatcgacacttgatgcaacaaattggttccattgggaataat
gaaaaacttatttccttcaatgacaacagcaattcaattttctctgtctcacaacatgcc
ctttctactcataatgaggaacctgaggatgatagatcacctagaatgtctccattgcaa
agaaggcacatgaaccctatagatttggtagaggaagacttgttcgaaactcaatgtcct
gtatacaataatcattcccaacatcctaaccattctaaaacagagcgagcagttagtcaa
gattccctctcacaccctctgcataattcttccactgacttggctaacccagagaagata
atacctagaattggtactgatggttgtacttacttagacttacaatcaggtgggttattg
ttgaatgatgatctggggaccatgcctggtcacttagcttcaattgagaagtcagtgaat
ttgcaatcaagtcaatatgaatcaagcaatcgaagcaccacattgggggatggtgtttca
actaccggtggaatttgttcagatcctggtgacattgaaaatgaagttaggaagttaaaa
ttatctgctcataacctcaaaaatcatcaattatgccaaaaccctcagcaagttggcatg
ccatcacgtggctcttcttctcattctctaggtaatgagtctcaaattattgctgaagga
atttctcattctcagggtatgggctttagcttatctcatggtcatcctggtcaaccgaag
ttaacctcagctgatatgcaatcatcattgcaatctgctagttttgccccatcattatat
attacaggatctggatttggaactccatactatcacaattttcaatttccaggtttacct
cctcaattcagcatcaatggatgcacattgaatccctcagtagtgcctcaacttattaat
gtgtatccccatccccatagttcaattccagtgccttttgataatccagtgggatcaaac
ttcaccgctagagcttctgagagtcccagtgggggaggtattgtttctggagttgatatg
cactacaagaactatgaacagctaactgttcagcctcactttcctgatcccttgtacgta
cctttttgtcagcatccctctgtggatgcatttcaaaccccaggtcaatatgatccaatg
atctgtacggttggtgctattggaatcataccaggtaattgtgatgcacaaaagatttca
ggttatcctccccatttaattgatcataggcctcaaattccaagaatttctgcaagcact
cctgattctactaaaggaattccttttagtcccagctactatggaagccctgctagcatt
gatgtcatgcaattgccaagctctccacttgcctctcatgtttttattgggtctcaattg
ccaagctctccacttgccagtcctgtttttattgggtcaccagtagcaggtgcaggtttt
tcaggaaggaaaaatgaaaacattaaatttccatttggttctgaaaaaaacacaactgct
tctggatggaaaagccaaagaggatgtgagaaggttgatgatccattgcattctttcttg
gaagagctgaagtctaataaagcacgaagatatgaattgtctgatatttctgggcgtatt
gttgaatttagttctgatcaacatgggagtagatttatacaacaaaaattggagaattgc
agcatacaagataaggcatctgttttcaaggaaatccttccacatgcttcttcattaatg
actgatgtgtttggaaactatgtcattcaaaaggtatatgctggagtgttgcataatttg
catctattagtttctgaccataaatttgtaataatccttccacgtgcttcttcattaatg
actgatgtgtttggaaactatgtcattcaaaagttttttgagcatggaactcctgaacag
aggaatgaacttgcttataagcttgtttgcaatgtgttgcctttgagccttcagatgtac
ggctgtcgtgtaattcaaaaggctcttgaggttattgagcttgatctgaaaacacagctt
gtgcaagaacttgatggacatgtcatgaaatgtgtcagagatcagaatgggaatcatgtt
attcaaaaatgcattgagtgcgtacctactgaaaaaatcactttcataatatctgcattt
catggtcaagttgcaacactatcaacccatccatatggttgtcgagtgattcagagagtt
ttagaacattgtacagatgagtcccaaagtcggtgcattgtggacgagattctgcaatct
gtgtgccagcttgctcaagatcagtatggcaactatgtcactcagcatgtattagagaaa
ggaaagccacatgaaagaagccaaatcatcagcaagctatctgggaaaattctgcagatg
tgccagcacaaatttgcttcaaatgttgttgagaagtgtatcaaatatggtaatgctgaa
gaacgagatcacttgatcaaggaaataattggagaaactgaagacagtgataatttattg
gtaatgatgaaggatcaatttggaaattatgtgattcaaaagattcttgattcatgcact
gataaacaacgcgagatcttggtcaaccgcataaaggttcatttgcagtccttaaagaaa
tacacttacggaaagcatattgttgcccgggttgaacaactatgtgcagatgctcctgaa
tcacctgaatcatga
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