Zingiber officinale (ginger): 122007927
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Entry
122007927 CDS
T08725
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4-like
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122007927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122007927
03032 DNA replication proteins [BR:
zof03032
]
122007927
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
122007927
Prokaryotic type
122007927
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
122007927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
122007927
NCBI-ProteinID:
XP_042419400
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All DBs
Position
8A:complement(21607004..21609092)
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AA seq
616 aa
AA seq
DB search
MSSTVAEIPSPSPVDTEKKKKKKKSKDDKKTAADDDVLPHLPSATEGVDDKDFFIKPQSF
TPSVDTSSWPILLKNYDRLNVRTGHYTPLPAGHSPLKRPLAEYLRYGILNLDKPSNPSSH
EVVAWIKRILRSEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVARLHSDV
PDVAKVARALETLTGAVFQRPPLISAVKRELRIRTIYDSKLLEYDPERHLVVFWISCQAG
TYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWMYDNFKDESYLR
RVVMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEVGEEIVLMTTKGEAI
ALGIAEMTTAVMATCDHGSVAKIKRVVMDRDTYPRKWGLGPRALQKKKMIAEGLLDKHGK
ANEKTPAEWQRNVVLPAGGDSMVASLAAAPEPEVQKEGEIIEVKKHKKKHKDKDNEGDNE
TEGRKRKLEDTAEEPAAKKLKVEEVEEGVGGDEVKKLKKVKVEEVEDAKVEAKVEEELNE
KSVKKKKKKEKSSKNISEVDSSDEEKSTEKKKKKKKKHSGGEEAELAASLTENTDAEKSQ
KKEKKKKNRDAELIEA
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgacggtggctgagatcccctcgccatcgccggtcgatactgagaagaagaag
aagaaaaagaagagcaaggacgacaagaaaaccgccgccgatgatgacgtccttcctcac
ctcccttccgccaccgaaggcgttgatgacaaggactttttcatcaagccccaatctttc
accccttccgtcgacacttcctcatggccgatcctccttaagaattacgaccgactcaac
gtccgcaccggccactacacgccgctcccagctgggcattcccccctcaagaggcccctt
gcggagtacctccgttacggcatcctcaacctcgacaagccctccaacccctcctctcac
gaggtcgttgcctggatcaagcgcatcctccgctccgagaagaccggccatagcggtacc
ctcgaccccaaagtcaccggaaatcttattgtctgcatcgatcgtgccactcgtctcgtc
aagtctcagcagggcgccgggaaagagtacgtctgcgtcgcccgactccactctgatgtt
cccgacgtcgccaaggtcgcccgcgccctggagacccttaccggtgcggtcttccagagg
ccccctctcatttctgctgtcaagcgcgagctccgcatcaggactatctacgacagtaag
ctgctcgagtatgatcccgagcgccacctcgtcgtcttctggatctcttgtcaggctggc
acctacgtccgtaccctctgcgtccatctcgggctgattcttggcgtcggagggcatatg
caagagctgcggcgtgtccgttcagggatcctcggcgagaaggacaacatggtgaccatg
cacgatgtgatggacgcccagtggatgtatgataacttcaaggatgagagctacttgagg
cgggtggtgatgccgttggaggtggttcttactagctacaagaggctggtcgtcaaggac
tctgcagttaatgctatttgctatggtgcgaagctgatgattccggggcttctgagattt
gagaatgatattgaagtcggcgaggaaatcgtgttgatgaccacaaaaggggaagcgatc
gctctgggaattgctgagatgactactgctgttatggcaacatgcgaccatggatcggtt
gctaaaattaagagggtggtgatggacagggatacttatcccagaaaatgggggttgggg
ccgagagctctgcagaagaagaagatgattgctgaggggctcctggataagcacgggaag
gccaatgagaagactccagctgagtggcaaaggaatgtggtgctgccagccggtggggat
tcaatggtcgccagcctcgccgccgcaccggagcctgaggtgcagaaggaaggagaaatt
atagaagtgaagaaacataaaaagaaacacaaagacaaggataacgagggtgataatgaa
acggaaggaaggaaacgcaagttggaggatactgccgaagaaccagctgcgaagaagctg
aaggttgaggaggtagaagagggtgtcggtggtgacgaagtaaagaagctgaagaaagtg
aaagttgaggaggttgaagatgctaaagtggaggccaaggttgaggaagaactgaatgag
aagagtgtaaaaaagaaaaagaagaaggaaaagagcagtaaaaatataagtgaagtcgat
tcttcagatgaagagaaatcaactgagaagaagaaaaagaaaaagaagaagcactcaggt
ggtgaagaggctgaactcgcagccagcttgacagagaacactgatgcagagaaaagccag
aagaaggagaagaagaaaaagaaccgtgatgctgagttaatagaagcctga
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