Zingiber officinale (ginger): 122007929
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Entry
122007929 CDS
T08725
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00040
Pentose and glucuronate interconversions
zof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122007929
Enzymes [BR:
zof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122007929
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122007929
NCBI-ProteinID:
XP_042419404
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Position
1A:complement(184845543..184847184)
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AA seq
447 aa
AA seq
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MESSRPKLLFLCFIFLASAASTTAHIAEYDEYWEKKAALARAASQAAYNPNPESVANTFN
ADVHREMDKAEVEHAIMNSTRRGLRGRKKKGGPCVATNPIDRCWRCRGDWNKNRKRLAKC
ARGFGRHTTGGLAGRFYVVTDPRDDDMVNPRKGTLRWGVIQNRPLWIIFAKDMIIRLSEE
LIVNSNKTIDGRGVNVRIANGAGITIQYVHNVILHSLHIQDITQGNGGLIRDSETHYGLR
TRSDGDGISIFGSTNIWVDHVSMSNCGDGLIDAIMGSTAITISNSHFTQHNDVMLFGASD
AYSPDALMQITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSKHPTILSQG
NRFFAPPNIHAKEVTKREYSPDNVWKDWSWRSEGDLMRNGAFFVPSGRDPDKSTFDQKDL
IKAKPGTFVARLTRYSGSLDCVRGQPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggagtcatcaaggccaaagctcctcttcctctgcttcatcttcttggcctccgctgcc
tccaccaccgcccacatcgccgagtacgatgagtactgggagaagaaggcggcgctggcc
cgcgccgcgtcccaagccgcctacaaccccaaccccgagtccgtcgccaacaccttcaat
gccgatgtccacagagagatggataaggcggaggtggagcatgcgatcatgaacagcacg
aggagagggctgcgcgggaggaagaagaagggcgggccgtgcgtggcgacgaacccgatc
gaccggtgctggaggtgccgcggcgattggaacaagaaccggaagcggctggcgaagtgc
gcgagggggttcgggcggcacaccaccggcgggctggccgggcggttctacgtcgtgacc
gacccgagggacgacgacatggtgaacccgcggaagggaactctgcggtggggcgtgatc
cagaaccggccgctctggatcatcttcgccaaggacatgatcatccgcctcagcgaggag
ctgatcgtgaacagcaacaagacgatcgacggccgcggagtcaacgtccgcatcgccaac
ggcgccggcatcaccatccagtacgtccacaacgtcatcctccacagcctccacatccag
gacatcacgcaggggaacggcggcttgatccgcgactccgagacgcactacggcctccgc
acccgcagcgacggcgacggcatctccatcttcggctccaccaacatctgggtcgaccac
gtctccatgtccaactgcggcgacggcctcatcgacgccatcatgggctccaccgccatc
accatctccaactcccacttcacccagcacaacgacgtgatgctgtttggagctagcgat
gcttactcgcccgatgcgctcatgcagatcaccgtcgccttcaaccacttcgggagaggt
ctcgttcagagaatgccaagatgccggtggggattcgtccacgtcgtgaacaacgactac
acccactggctgatgtacgcgatcggcggcagcaagcaccccaccattctcagccaaggg
aaccgattcttcgctccaccaaacatccatgccaaagaggtgacgaagagagagtactcg
ccggacaacgtctggaaggactggagctggaggtcggaaggtgacctgatgcggaacgga
gcgttcttcgtgccgtcgggaagggacccggacaagtcgacgttcgaccagaaggatctg
atcaaggcgaagccgggaacgttcgtggccaggctcacgcgctactcgggctccctcgac
tgcgtccgaggccagccctgctaa
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