Zingiber officinale (ginger): 122007951
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Entry
122007951 CDS
T08725
Name
(RefSeq) transcription factor MYC2-like
KO
K13422
transcription factor MYC2
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04016
MAPK signaling pathway - plant
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122007951
04075 Plant hormone signal transduction
122007951
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122007951
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122007951
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_SAC51
bHLH_INO4
Motif
Other DBs
NCBI-GeneID:
122007951
NCBI-ProteinID:
XP_042419422
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Position
8A:complement(22148831..22151196)
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AA seq
660 aa
AA seq
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MNLWTDDSASAMDAFMTSADLQGFPWLLPSTPPPPSTQDSLQHRLQALIDGAREPWTYVI
YWQSSVDDASGASLLGWGDGYYKGCEEHKRKQRSGTASFSAEQDYRKRVLRELNSLISGG
GGPSGTDEAVDEEVTDTEWFFLVSMTQSFVNGSGIPGQVFYAGNPSWIAGAGRLAAATCE
RARQAQALGLQTMVCVPVGSGVLELGSADIIAHNTEIMGQIRAHFNFNSPDAPSVSAAGG
ASSSWLTPQSAAATPAPELGETDPSVLWLTDPAAIEMKDSVSATANISVTKAPIQFENNP
SSTMLTQNPSSSVQIQKHHQQLQHQNNPQNHSSFFSKDFNFSELNSNPSIAPQSFKPDSR
EILNFSGSKNSSSLAPVAVAGGFLSHPQAAAVPAAAVDNKKNKKSTGAVSSVTNDEAMLS
FSSAPTRPPSNGQLLSSGCGAIPDGPDSDQSDLDASMREVESSRVVEPEKRPKKRGRKPA
NGREEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAVSYIEELRSKIQAL
DLEKEELQAQSDALKQQHASAPARPTGYNHKAMNGASRCFGVELEVKILGLEAMIRVQCQ
RRNHPAATLMAALQELNLEVHYASVSVVKDLVIQQATVKMSSQVYTQEQLNTALYSRLTS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacttgtggacagacgacagcgcctccgccatggacgccttcatgacttccgccgac
ctccagggcttcccctggctccttccctccactcccccgccgccctccacccaggactcc
ctccagcaccgcctgcaggctcttatcgacggggcgcgcgagccctggacctacgtcatc
tactggcagtcctctgtcgacgacgcctccggcgcctccttgcttggctggggcgacggt
tactacaagggctgcgaggagcacaagcggaagcaacgatctgggaccgcatccttctcc
gccgagcaggattacaggaagcgcgtcctgcgcgagctcaactcgctcatttccggcggc
ggcgggccctccgggactgatgaggccgtcgatgaggaagtcaccgacacggagtggttc
ttccttgtgtccatgactcagtccttcgttaacggcagcgggatccctggacaggtcttc
tatgccggtaacccttcctggattgctggcgccggccgccttgccgcggcgacctgcgag
cgagcacgccaggcgcaggccttgggcctccagactatggtctgtgtccctgttggctcc
ggcgtgcttgagctcggttccgccgatatcatcgcccacaacaccgagatcatgggccag
atccgcgcccacttcaacttcaactctcccgacgccccatccgtttctgcagcaggcggc
gcttcgtcatcctggttgacaccacaatctgcagcagctaccccagcccctgaactgggg
gagaccgatccgtccgtgctttggctcacagatcctgcagcgatcgaaatgaaggactcc
gtctctgccactgccaacatatcagtcacaaaagccccaattcaattcgaaaacaaccct
agctccaccatgctcacccagaaccctagctcttcggtccagatccagaaacatcaccaa
cagttgcagcaccagaataatccgcagaaccattcttctttcttctccaaagacttcaat
ttttcagagttaaactcgaatccgtccatagctcctcagtcgttcaagccggattccagg
gaaatcctcaatttttctggtagcaagaacagttcctcgctcgccccagttgcagttgca
gggggcttcttgtcccatccccaagcagctgccgtccccgctgccgcggtggacaacaag
aagaacaagaaatcaaccggggcggtatccagtgttaccaacgacgaagccatgctttcc
ttctcttcggctccaactagaccgccctccaacggccaactgttgtcttccggctgtggc
gcgattccggacggcccggattccgatcagtccgacctcgacgcctcgatgcgggaggtg
gagagcagccgagtggtggaaccagagaagcgaccaaagaagcgcgggaggaagcctgcc
aacggccgtgaggaacctctaaatcacgtagaagccgaacggcagcgccgcgagaagctc
aaccagagattctacgctctccgcgccgtagtccccaacgtgtccaagatggacaaagcc
tccctcctcggcgacgccgtctcatacatcgaagaactccggtcaaagatccaagctttg
gacctcgagaaggaggagctacaagcacaatcggacgccctcaagcaacagcacgcatcc
gcccctgctcggccaactgggtacaaccacaaggccatgaatggcgcaagtcgatgcttt
ggggtggagctggaagtgaagatactgggattagaggccatgataagagtacagtgccaa
agaaggaatcacccggccgcgacgctgatggctgcgctgcaagagctgaatctagaagta
cactacgccagtgtgtccgtggtgaaggacctcgtgatccagcaggctacagtcaagatg
tcgagccaagtgtacacacaggagcagcttaatactgccctctactctcgattgacctca
tag
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