Zingiber officinale (ginger): 122008021
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Entry
122008021 CDS
T08725
Name
(RefSeq) transcription factor MYB2-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122008021
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122008021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_CHD1_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122008021
NCBI-ProteinID:
XP_042419530
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Position
8A:9409186..9410606
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AA seq
268 aa
AA seq
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MSDKSSSSSIKYQEMELRRGPWTLEEDSLLIHYIACHGEGRWNLLARSSGLKRTGKSCRL
RWLNYLKPDIKRGNLSAEEQLLILELHSKWGNRWSRIAQYLPGRTDNEIKNYWRTRVQKQ
ARQLRVDANSSVFRDAVRCYWMPRLLDEASASAAIAAAATPLFSQHPPDPQFLHRQEFPQ
LPTENCNSRVLIPHMPQSSSNDQDQLARFDPPPMEAAAITTPDDVNFDPAFNNYSSNCSD
IVSDMTNGEQSEWGMDELYGMLRSYMKY
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaagtagttcatcgtccatcaaatatcaggagatggagctacggcgaggt
ccctggactctagaggaagattctctcctcatccactatattgcctgccacggcgaaggt
cgctggaacctcctcgctaggtcctcagggttgaagagaaccggcaagagctgccgtctc
cggtggttgaattatctgaagccggacataaagcgcggcaatctctccgccgaggagcag
ctcttgatcctcgaactccactccaagtggggcaacagatggtctcggatcgcacagtat
ttaccagggcgaaccgacaacgagatcaagaactactggcggacgcgggtgcagaagcaa
gcgcggcagctgcgggtcgatgccaacagcagcgtcttccgtgacgccgtccgctgctac
tggatgccgcgactgctcgacgaggcctccgcttccgctgccatcgctgccgccgccact
cccttgttctcacagcacccacctgaccctcagtttttacatcgtcaagaatttcctcaa
ttacccaccgagaattgcaactcccgagtcctcatccctcacatgccccaatcctcctcg
aacgatcaggatcagctcgcacgattcgatcctcctccaatggaagccgccgccataacg
acgccggacgatgttaactttgatccggccttcaacaattactccagcaattgcagcgat
attgttagcgacatgactaacggtgagcaaagcgaatggggtatggatgaactctatggc
atgctgagaagctacatgaaatactag
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