Zingiber officinale (ginger): 122008059
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Entry
122008059 CDS
T08725
Name
(RefSeq) protein YABBY 4-like
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122008059
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
122008059
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
Ccdc124
HMG_box
KWL1
Zn_ribbon_Elf1
Zn_ribbon_12
Motif
Other DBs
NCBI-GeneID:
122008059
NCBI-ProteinID:
XP_042419576
LinkDB
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Position
8A:23481627..23484712
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AA seq
265 aa
AA seq
DB search
MSSSSAAFSLDHLSPPPSEHLCYVHCNFCDTVLAVSVPYTSLFKTVTVRCGHCTNLLSVN
MRGLLLPAANQLHHLSHGCFNPPHQNLLDELQCQPPSLLLDPSMLCNTNNGNSCSNNGSS
LISSNAAAGINNGNAMATAVKGVEDDQLPRAPVVNRPPEKRQRVPSAYNRFIKDEIQRIK
AGNPDITHREAFSAAAKNWAHFPHIHFGLMPDQGLKKANLRQLPEGAEDVLPKEGFYPTA
AAAAAAAASAAAAAAAAANTGVTPF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctcctcagccgccttttccttggaccacctctccccacccccttccgagcac
ctctgctacgtccactgcaacttttgcgacaccgtcctcgcggtgagcgttccctacacc
agcttgttcaagacggtgacggtgaggtgcggccactgcaccaacctcctctccgtcaac
atgagaggccttcttctccccgccgccaaccagctccaccacctcagccatggctgcttc
aacccacctcatcaaaacctcctggatgagctgcagtgccagccgccgagcttgctgctg
gatccctccatgctatgcaatactaacaacggcaacagctgcagcaacaacggcagcagc
ctcatcagcagcaacgccgccgccggcattaacaacggcaacgctatggcgactgcagtg
aaaggggtggaagacgaccagctcccacgcgccccagtggtcaacagacctccggagaag
aggcagagagttccatctgcgtacaatcgattcatcaaggacgaaatccaacgcattaag
gctgggaatcccgacatcactcacagggaggccttcagcgccgctgcgaagaactgggcc
cactttccgcacatccatttcggcctgatgcccgatcagggtctgaagaaggccaacctg
cgccagcttccggaaggggctgaggatgttcttcccaaggagggcttctaccccacagcc
gctgccgctgccgctgccgctgcctctgccgctgccgctgccgctgctgctgcaaacacg
ggagtcactcctttctaa
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