Zingiber officinale (ginger): 122008148
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Entry
122008148 CDS
T08725
Name
(RefSeq) transcription factor MYB3R-5-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122008148
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122008148
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GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
122008148
NCBI-ProteinID:
XP_042419692
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Position
8A:complement(27119291..27146787)
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AA seq
616 aa
AA seq
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MKVEQSCVENRQLAGASSSSLSDGSYGLSRVSTAISSPLKSSSSRRRTSGPIRRAKGGWT
LQEDETLRKAVEAYKGRCWKKIAEFFPDRTEVQCLHRWQKVLNPELIKGPWTLEEDEKIT
SLVAKYGPTKWSMIAKSLPGRIGKQCRERWHNHLNPVIKKDAWTEEEELVLMNAHHEYGN
KWAEIAKVLPGRTDNSIKNHWHSSLKKKLDFFLATGKLPPVPVDGSKDMRSLDSRQSLHC
SSDGSDINARAFSESASSMDIDLPARQGLEDQKHRLESSTVESKMEAINNLIVRRIHDPI
VEFSTHTESSTIEPKKEAVNNLIVRIIHDPAVESSTHTLTPDICTRSDPGTELAECSNTI
DKDQNVESKLEALANPNVRGIHSPSVHCIKDIPTFDVSTRSPENEVTDCRNTDEDSRLNC
VSEPMHQETPLGSLYYKPPQVKDICLSENYTVITTSTNMQQSCGSCVVISPEGYLTPSSV
TAKGPIQDVHSILKNAARSFPSTPSIFCRGKKMAETTLDSDASTSGVKSAKLMDNCASTG
EGKNIHNLETIDNSKLRSNPCDKGDLSNNRKNFDVSPPYRFRFKRTATIKSVEKQLDFSE
NDSNGKTNPLILDVDT
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggaacagagttgtgtggagaacaggcaattggcaggagcctcgagctcgtcc
ctctctgatggaagttacggtctgtcgagggtttcgacagctatttctagcccactgaag
tcttcttcgtcacggaggaggactagtggtcctataaggcgagcaaagggtggctggaca
ttacaagaggatgagacgctgaggaaagctgttgaagcttacaagggaagatgttggaag
aaaatagctgaattttttcctgatagaactgaggtccaatgtcttcatcggtggcaaaag
gttctcaatccagaactcattaaaggtccatggaccctagaggaagatgagaaaatcacc
agtcttgtagcgaaatatggacctacaaaatggtccatgattgcaaaatctcttcctggt
cgtattggtaaacaatgtcgagagaggtggcataatcatctaaatcctgtgataaaaaaa
gatgcttggactgaagaggaggagcttgttctcatgaatgcccatcatgaatatggaaat
aaatgggcagaaattgccaaagtcttacctggaaggactgataactcaataaagaatcac
tggcatagttcgttaaagaaaaagttagatttctttttggctactggcaagcttccacct
gttcctgtggatggttcaaaggatatgagaagccttgacagcagacaatcgcttcattgt
tcaagtgatgggtcggacataaatgccagagcgttttctgaatcagccagttccatggac
attgatctccctgctagacaagggttggaagaccaaaaacacaggttagaatcatcaaca
gttgagtctaagatggaagctataaacaacttgattgtgagaagaattcatgatcccatt
gttgagttcagcactcatacagaatcatcaacaattgagcctaagaaggaagctgttaac
aacttaattgtgagaataattcatgatcctgctgtagagtccagcactcatactctcaca
cctgatatctgcactagatctgatcctgggacagagttggcagaatgtagtaacactatc
gacaaggatcaaaatgttgaatcaaagttggaagctttagctaatccaaatgtaagagga
attcacagtccctctgtacattgcattaaagatataccaacctttgatgtctcaactaga
tctccagaaaatgaagtcacagattgtagaaacactgatgaggatagtcgactgaattgt
gtatctgagccgatgcaccaggaaactcctcttggttctctctattataagccacctcag
gtaaaagatatttgtctttctgaaaattatacagtcataaccacatctacgaatatgcag
caatcatgtgggtcatgcgttgtgatatcacctgaaggttacctcactccgtcctcagta
acggcaaaaggtcctattcaagatgttcattccattttaaaaaatgcagctagaagtttc
ccaagcactccgtccatattctgcagaggaaaaaagatggcagaaacaactcttgattct
gatgctagtacttcaggggtaaagtctgcaaaacttatggacaattgtgcttctactgga
gaaggaaaaaatatacataatttggagacaattgacaattcaaagttaagatcaaatcct
tgtgacaaaggagacttatcaaacaacaggaagaactttgatgtttctcccccatacagg
tttagattcaaaagaactgcaactatcaaatctgtggagaagcagcttgatttttcagaa
aatgattctaatgggaaaacaaacccccttatattggacgtggacacttaa
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