Zingiber officinale (ginger): 122008167
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Entry
122008167 CDS
T08725
Name
(RefSeq) coatomer subunit beta'-1
KO
K17302
coatomer subunit beta'
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122008167
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122008167
Membrane trafficking [BR:
zof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
122008167
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122008167
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR35_TULP_N
WD40_like
TPR_1
Beta-prop_DCAF12
TPR_2
WD_LRWD1
TPR_8
Clathrin
Motif
Other DBs
NCBI-GeneID:
122008167
NCBI-ProteinID:
XP_042419718
LinkDB
All DBs
Position
8A:complement(27617599..27632927)
Genome browser
AA seq
903 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVGIWNYQSQTMVKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKIFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKIWNLGSPDPNFT
LDAHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKIG
REVPVASMEGSGKIIWAKHNEIQTVNIKTIGAEFEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFVWSSDGEYAIRESTSRIKIFGKTFQ
ERKSIRPAFSAEHIYGGILLAMCSNDFICFYDWAECRLIRRIDVSVKNLYWADSGDLLVI
ASDTSFYILKYNRDVVSSYLENGKPVDDDGVEEAFELLHEVNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVIGYTLLLSLIEYKTLVT
RGDLERAKGILPSIPKEHHNSVAHFLESRGMIEDALEVATDPNYRFDLSVQLGQLEIAKE
IATEVQSESKWKQLGELALSTGKLEMAEECLSQAMDLSGLLLLYSSLGDAEGIIKLASLA
KEHGKNNIAFLCLFMLGKLEDCLQLLVDSHRIPEAALMARSYLPSKVSEIVSFWKKDLSK
VNPKAADSLADPEEYPNLFDHWQIALAVESNLAPSRGKYPSAEEYLSYVERSNVNLVEAF
RSMQVDEESTPLENGDYGHEVTKEDGVESPEEPVEVDVDDSTDSAVLVNGNEGEEQWVLT
PQE
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagattagaaatcaagcgaaaacttgctcaaaggtcagaaagggtcaaatct
gtggatcttcatccaactgagccatggattcttgcgagtctttattctggaacagttggc
atctggaactatcagtcacagacaatggtaaagtcctttgaagtaactgaattaccagtg
agatctgcaaagtttgttgcccgaaagcagtgggtggtggctggtgcagatgatatgttc
atccgtgtctacaattataacacaatggataaagtcaaaatatttgaggctcatacagac
tatattaggtgcgtggctgtacatccaacactgccatacgtgttgtcatcatcagatgac
atgctgataaagctttgggactgggagaagggttggatgtgtacccaaatttttgaagga
cactctcattatgtgatgcaagtgacttttaatccaaaggacaccaatacttttgcaagt
gcctctttggaccgtacagtaaagatctggaatcttggttctcctgacccaaattttaca
ttagatgctcattccaaaggagtaaactgcgttgattattttactggaggtgataggcca
tatttgattactggttctgatgaccagactgctaaggtttgggactaccaaaccaagagt
tgtgtacaaacactggaaggccatacccataatgtctctgctgtatgtttccatcctgag
cttccaataataataacaggttcagaggatggaactgttagaatttggcatgcaactaca
tatagactggagaatacactaaactatggtctggaacgagtttgggctattggatacatg
aaaggatcaaggagagttgtaataggatatgatgaaggaaccattatggtgaagattggc
cgtgaagttccagttgctagcatggaaggcagtggaaaaatcatttgggcaaagcacaat
gagattcaaacagttaatatcaagacaattggagcagaatttgaggtcacagatggtgaa
agattgcctttagctgtcaaggaattaggaagttgtgatctctacccacaaagcttgaag
cataacccaaatggaagatttgttgttgtctgtggagatggagagtacattatatatact
gcactggcatggagaaatagatcatttgggtctgctttggagtttgtctggtcttctgat
ggagagtatgcaatcagggaaagtacatcaaggattaagatctttggtaaaaccttccag
gagagaaaaagtatccggccagccttttctgctgaacatatttatggaggaatactatta
gcaatgtgctccaatgacttcatttgcttttatgattgggctgaatgtagattaatacgt
cggattgatgttagtgttaagaacctgtattgggctgatagtggtgaccttctagtcata
gcaagtgatacatcattctacatattgaagtacaatagagatgtcgtttcctcttaccta
gaaaatggtaagccagtagatgatgacggagtagaagaggcatttgagctgctgcatgaa
gtaaatgagcgtgttcgaactggtatatgggttggtgattgtttcatttataacaattct
tcttggcgacttaattattgcgttggtggagaggtcaccaccatgtttcatttggaccgt
cctatgtacttgttgggatatcttgctagtcaaagtcgtgtgtatctaattgacaaggag
ttcaatgttataggctataccttactcctcagtttgattgaatataaaactcttgttacg
cgtggggatctagaacgtgcaaaaggaattttaccatcaattccaaaggaacatcataat
agtgtggctcattttttggaatctcggggaatgatagaggatgctcttgaagtagcaact
gatcctaattacagatttgatttatctgttcaacttggtcaattggaaatagcaaaggaa
attgctacagaagtacaaagtgaatctaagtggaaacagttgggagagctggctttgtct
actgggaagttagagatggctgaggaatgtctatcacaagctatggatttgagtggattg
ttgcttctttactcatcccttggtgatgctgaagggataataaaactcgcgtctcttgca
aaagaacacggaaagaataacattgcatttctttgtctattcatgctaggtaaactggaa
gattgccttcagttattggtggacagtcatcgcattccagaagctgcactgatggcaagg
tcatatcttccaagcaaagtatcagaaattgtatcattttggaaaaaagatcttagtaag
gtgaatccaaaagctgctgattctttggctgatcctgaagagtaccctaatttatttgat
cactggcagattgctttggctgttgagtcaaatcttgctcctagcaggggtaagtatcct
tctgctgaggaatacttgagctatgtggaaaggtcgaatgtcaatcttgtggaagctttt
agaagcatgcaagttgatgaagagagcacgcctcttgaaaacggtgattatggtcatgag
gtgacaaaggaagatggggtagagagtccagaggaacctgttgaagttgatgtagatgat
tctactgacagtgcggtccttgtcaatgggaatgagggagaggaacagtgggtgctaact
ccgcaagaatag
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integrated database retrieval system
