Zingiber officinale (ginger): 122008186
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Entry
122008186 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122008186
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122008186
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
122008186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-RING_UBOX
MSSS
Flagellin_arch-type
Motif
Other DBs
NCBI-GeneID:
122008186
NCBI-ProteinID:
XP_042419750
LinkDB
All DBs
Position
8A:28076566..28087113
Genome browser
AA seq
869 aa
AA seq
DB search
MEKEETERIGSAAGGDEDAPASAIDRQQVDAAVLHYQNQRLVQQLEAQKAEMHTLEGKFK
ELREKQSSYNKSLMALHKMWNQLVEDLILLCIRAGGDLHSMQMLDYEDHSKDALESCSPE
EVFLFRLTRLNPTEKKVENLFANVVQEALASRRSATINLMKYVLDMITSRRAKNECLVFA
LQGNLSSEDAVSQLQKFDESLREVVNNMHQAADVLSQKHKQITEEINICKINFSTTESEI
KRISGELEESMAELEETRRKLAIMQMHMHGASTAHALIANGSSSPDKCVDRTMGLKDLKE
SIEEAKTLAASRLLELQEAQEDFLIVSKQLEDLQSQLKDENYVISSKQYSLINDQLQHLN
AELARYKSLIESFQADRTNYLLRENELNVKADSADSIKVSIRNHEAKIAEFEIQIQNFTA
EKNNLESKLEEAEQDLGRKDIKDEIHVMASALTKEMEMMESQLNRSKEAASEALALREEA
ESLRSLLNRKVLEHKTLSDEYAKEMVERKPLKELVENLEKEKQELQIILDMHGKEYHDTR
TISEIKESEQRARVQADLLKATLAENSLELRVKAANDAEATYNQRHSVAEAEIPELRARL
DAAKRDVLELQETIRIKEAEGEAYISEIETIGQAYEDMQTQNQHLLQLVADRDAYNIKLV
SDSVKMKQTHSSLLSEKQTISKQLQQVNSSLEFLKTKVTNGEEQMKAHVTQAVKASTESR
HININMEKNKLELIDAEKELKWLRTTVSSVEKEYERNQKKITDLRIELEKERKERKKLEE
ELTEVKAEVLEMSSESEEVTIQKLQDEIKECKAILKCGVCFDRPKEVVITKCFHLFCYPC
IQRNLEIRHRKCPGCGTAFGQNDVREVKI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggaagagacggagaggatcggctccgccgccggaggcgatgaagacgctccc
gcatccgccattgacagacagcaggtggatgctgctgttcttcattaccagaatcaaagg
cttgtccagcagttggaggcacaaaaggctgaaatgcacacactagaaggaaagtttaaa
gagttgagggagaaacaaagttcttacaacaaatctttgatggcactacacaagatgtgg
aatcagctagttgaggatttaattcttctttgtattcgagctggtggtgacctccattcc
atgcaaatgctggactatgaagatcactccaaagatgcccttgaatcatgttctccagag
gaggtttttcttttcaggcttacgagattaaaccctacagaaaaaaaagttgagaactta
tttgctaatgttgttcaagaagcacttgcttcacgccgttcagccactatcaatctgatg
aaatatgttttggatatgattacttcacggcgagccaagaatgaatgcttagtttttgct
ttacaagggaatttatcctcggaagatgctgtttctcaacttcagaagtttgatgaatcc
ttgcgagaggttgttaataacatgcaccaagctgctgatgttctctctcagaaacacaaa
cagattacagaagaaataaacatttgcaaaatcaacttttcaactacagaatctgagatt
aaacgcatttcaggtgaattggaggagagcatggcggagcttgaggaaactcgacgcaag
ttggcaattatgcaaatgcatatgcatggagcatctacagcacatgctttaattgcaaat
ggaagtagttcgccagataaatgtgtagatagaaccatgggattgaaggatttgaaagag
tcaatcgaggaggctaagacattggctgctagccgtcttttggaacttcaggaagctcag
gaagatttcttgattgtttcaaagcaattggaagatcttcaaagccaattgaaggatgag
aattatgttatctcatcaaaacagtactctctgataaatgatcaacttcagcatctgaat
gcagaacttgctcggtacaagagtctgattgaatcctttcaggctgataggaccaactac
ttgctaagagagaatgaattaaatgttaaagcagattcagctgattctattaaggtttct
attagaaatcatgaggcaaaaattgcagaattcgagattcagattcagaattttactgcc
gagaaaaataatcttgaaagtaaacttgaagaagctgagcaggatttaggtaggaaagat
atcaaggatgaaattcatgtcatggcttccgctttgactaaggaaatggaaatgatggaa
agccagttaaataggtcaaaagaagcagcttctgaagcacttgcattgcgtgaagaagct
gagtcattgaggtccctgctcaataggaaggtacttgaacacaaaactctgtccgatgaa
tatgcaaaagaaatggttgagagaaaaccgcttaaagaactggttgagaatttggaaaaa
gaaaaacaggagttgcaaatcattttagatatgcatggaaaagaatatcatgacactcgg
acaatatccgaaatcaaggaatcagaacaaagagctcgtgttcaagctgatctcttaaaa
gctaccttagctgagaacagtcttgagttacgagtgaaagcagcaaatgatgctgaggca
acttacaatcaaagacattctgttgcagaagctgaaataccagaactaagggccagatta
gatgctgctaagagagatgtcttagagcttcaagagaccataagaataaaagaagctgaa
ggcgaggcctatatttcggaaatagagacaattggccaagcatatgaagacatgcaaaca
cagaaccagcatttgcttcaactagtggctgatagagatgcctacaatatcaagctagtt
tcagatagtgtgaagatgaagcaaacccatagttcacttctttctgaaaagcaaactata
tcaaagcaactgcaacaagtgaacagctcgttagagttcttgaagacaaaagtaactaat
ggtgaagagcagatgaaagcacacgtcacacaagctgttaaagcttccacagaaagtagg
catattaatataaatatggaaaaaaataagttggagttgattgatgctgagaaagagctg
aagtggcttcgaactacagttagttccgttgagaaagaatacgaacggaaccaaaaaaag
attactgatttgagaattgaattagagaaggaaagaaaagagaggaaaaagctagaggaa
gaactcactgaggtgaaagctgaagtcttggaaatgagttctgaaagtgaggaagtcacg
atccaaaagctccaggatgagatcaaggagtgcaaggcgattctcaaatgcggtgtatgt
ttcgacagaccaaaggaggttgtgatcaccaaatgctttcatctattttgctatccatgc
atccagaggaacctggaaattcgtcatcgcaaatgccctgggtgtggcaccgcatttgga
cagaatgatgttcgtgaggtgaagatatga
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