Zingiber officinale (ginger): 122008256
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Entry
122008256 CDS
T08725
Name
(RefSeq) chaperone protein ClpC1, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
zof03110
]
122008256
Chaperones and folding catalysts [BR:
zof03110
]
Heat shock proteins
HSP100
122008256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
TniB
nSTAND3
AAA_14
AAA_18
NACHT
Mg_chelatase
Zeta_toxin
AAA_28
IstB_IS21
AAA_25
Torsin
DNA_pol3_delta2
Motif
Other DBs
NCBI-GeneID:
122008256
NCBI-ProteinID:
XP_042419867
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All DBs
Position
8A:29826904..29842607
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AA seq
922 aa
AA seq
DB search
MAGSLFQSAILPAVAVNKGQTQLLGSGNAKRSVQMMCYQRRPVLQLQGFAGLRRIDTLGS
SSRYKHDFCSMVSRYISYPQRKASGGAAKAMFERFTEKAIKVIMLAQEEARRLGHNFVGT
EQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLEL
SLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLESLGADPSNIRTQVIRMVGESTEAVG
AGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRKDQIERVTQILGRRTKNNPCLIG
EPGVGKTAIAEGLAQRIANGDVPETIEGKQVITLDMGLLVAGTKYRGEFEERLKKLMEEI
KQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDP
ALERRFQPVKVPEPTVDETIQILRGLRERYEIHHKLHYSDEALVAAAELSHQYISDRFLP
DKAIDLIDEAGSRVRLCHAQLPEEAKELDKELRQITKEKNEAVRGQDFEKAGELRDREME
LKAQISALIDKGKEISKAESEAGDAGPIVTESDIQHIVSSWTGIPVEKVSSDESDRLLKM
EETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALASYY
FGSEDAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKA
HPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNIGSSVIEKGGRRIGFDLDYDEKD
SSYSRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKAKDI
ELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSLAEKMLGGEIKEGDSAIMDVDSD
GNVAVLNGGSGLPESVPPSVPV
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggctggttctttgtttcaatcagcaattcttcctgctgttgcagtgaacaagggtcaa
actcagcttctaggctctggaaatgctaaaaggagtgtccaaatgatgtgttatcagaga
agacctgtacttcaattgcaaggctttgcaggcttgagaagaatagatacccttggctcc
tcgtcaagatataaacatgatttctgttcgatggtttcaagatatatatcttatccccag
aggaaagccagtggaggagctgctaaggctatgtttgagcgttttacagagaaggcaatt
aaagtaataatgcttgctcaagaagaggcaagacggttaggccacaattttgttgggaca
gaacaaatattgttgggccttattggtgaagggacaggaattgctgcaaaagttttaaaa
tcaatgggaattaatcttaaagatgccagggtggaagtggaaaagattattggaagagga
agtggctttgttgctgttgagataccttttacacctcgtgcaaaacgtgtgttagaactc
tctttagaggaagcccgtcaacttggtcataactatattgggtctgagcacctgcttctt
gggctccttcgtgagggtgaaggtgtagctgctcgtgtgcttgagagtcttggagccgat
ccaagtaacatacgtacccaggttattcgaatggttggagaaagcactgaagctgttggt
gctggggtaggtggaggaagcagtggcaataagatgcccacacttgaggagtatggaact
aatttgacaaagttggcagaggagggaaagttagatcctgttgttgggaggaaagatcaa
atagagcgagtcacacaaattctgggtaggcgtacaaagaataatccctgcctaattggg
gagcctggtgttggaaagacagccattgcagaaggacttgctcagcgcattgccaatgga
gatgttccagaaacaattgaaggaaaacaggtgattacacttgatatggggcttcttgtt
gctggtacgaaatatcgtggagaatttgaagaaaggttaaagaagttgatggaagaaatt
aaacaaagtgatgaaatcatactatttatcgatgaggtgcacacattaattggagcagga
gcagcagagggtgccatagatgctgctaatatcttaaaaccagctcttgcaagaggtgaa
ttgcagtgcattggagccacaacgcttgatgaatacagaaaacatatagagaaggatcct
gctttggaaagacgatttcagcctgtcaaagttccagaaccaacagtggatgaaacaata
cagatacttagaggacttcgcgaaagatacgagattcatcacaaacttcattattctgat
gaggctttagttgctgctgctgagttgtcccatcagtacattagtgatcgtttccttcct
gataaagcaatcgacttgattgatgaagctggatctcgtgttaggctttgccatgcacag
cttccagaggaggccaaggaactggataaagaacttaggcagatcactaaagaaaagaat
gaagcagtccgtggccaagattttgaaaaggcaggagaactgcgtgacagagagatggag
ttgaaggcccagatttcagctctgattgacaaaggcaaagaaataagcaaagcagagagt
gaggctggtgatgctggtcctattgtaacagaatcagacatccaacacattgtgtcttca
tggactggaattcctgtggagaaagtctcaagtgatgagagtgaccgccttctcaagatg
gaagaaactctccatacacgtgttattggccaggatgaggctgtcaaagccataagccgt
gccattcgtagggctcgtgtgggtcttaagaatcccaatcgtccaattgccagtttcata
ttttctggtccaactggtgttggtaaatcagaattggcaaaggccctagcttcttattat
tttggatctgaggatgccatgatccggcttgacatgagtgagttcatggagaggcatact
gtctcaaagctcattggctcaccccctggttatgttggttacactgagggtggtcagctc
accgaagcagttcgccgtcgcccctacactgttgtcctatttgatgagatagaaaaagct
caccctgacgtcttcaacatgatgctccagattctggaagatgggaggttgacagacagt
aaagggcggacggtggactttaagaacaccctcttaattatgacctccaatattggaagc
agtgtgattgagaagggaggacgtaggattggattcgaccttgactatgatgaaaaggac
agcagttacagccgaataaaaagccttgtcacagaagagttaaagcaatacttccgccca
gaatttctcaatcggcttgatgaaatgatagtcttcagacagctaaccaaactggaggtc
aaggagattgctgatataatgctcaaggaagtcttcgacaggctgaaagccaaggatata
gaactacaagtgacagagagattcaaggaaagggtggtggatgaaggttacaacccaagt
tacggagctaggccgctgagaagagctataatgaggctcctggaggatagcttggctgag
aaaatgctgggtggggagatcaaggagggagactcagctattatggatgtcgactctgat
ggcaatgtggccgtcctgaatggtgggagcggcttgcctgaatcagtgcccccatctgtt
cctgtatag
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