Zingiber officinale (ginger): 122008286
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Entry
122008286 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3-like isoform X1
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122008286
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122008286
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122008286
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
122008286
NCBI-ProteinID:
XP_042419910
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Position
8A:complement(30732036..30744602)
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AA seq
378 aa
AA seq
DB search
MAMRGVDFKWYDGFFLSMLATSIIIVSINWKRYHLCTHPLHIWIVVDYTTVFIFRLLMFV
DNGLAAGMGLDLGSEQRYARFCGRLVVLSILILLLYPFLWVWTVVGTLWFTSARSCLPEE
GQKWGFLIWLLFSYCGLVCIACISAGKWLTRRQAHLQRAQHGIPISEYGVLVDMIRVPEW
AFEAAGQELSGMGQDTAYHPGLYLTAAQREAVEALIQELPKFRLKGVPTDCSECPICLEE
FCVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALSNLQADSERPSPG
VVATASRYVRNQQPTGQSYLLRLQELLLRSVRGENAGAADNFADIESGGVQVVVSQVPPN
IIVPVVSYTVVDRALDRE
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcgaggcgtcgatttcaagtggtacgacggattcttcttgtccatgttggct
acgagcataattattgtgtcgatcaactggaagcggtaccatctatgcacgcatcccttg
cacatatggattgtggttgactataccactgtcttcatatttcgactgctaatgtttgtg
gacaacgggcttgcagctggaatgggtttagatcttggatcagaacaaagatatgctcgc
ttttgtggaaggctagtggttctttccattctcattttgctcctttatccttttctttgg
gtttggactgtggttggcacattatggttcaccagtgcaagaagctgtctgccagaagaa
ggccagaaatggggttttctcatatggctacttttcagttattgtggattagtttgcata
gcttgtatttctgctggaaagtggctgacacgtaggcaagcccacttacagcgcgctcaa
catggaattccaatctcagaatatggggttctggttgacatgataagagtacctgaatgg
gcatttgaagctgccggtcaggaactcagtggaatgggtcaagatactgcataccatcca
ggactgtatctaacggcagcccagagggaagccgtggaggctcttattcaagaacttccc
aagtttcgattgaagggcgttccgaccgactgcagtgaatgccccatctgccttgaagaa
ttctgtgttggaaatgaggtccgaggactcccatgcgctcacaacttccacgtggagtgc
atcgaccaatggctccggctgaacgtgaaatgcccaagatgccgctgctccgtgtttccc
aatctggacttgagtgccctctccaacctccaagcagattcggaacgcccttcgcccggc
gtggttgccactgcctcaaggtatgtacggaaccaacagcctaccggccagagctatctc
ctgcggctgcaggaactgctgctccgctctgtgcgcggcgagaatgcaggtgcagctgac
aactttgctgacattgagagtggaggagtacaggtagtcgtctctcaggtgccacctaat
ataattgtccctgttgtgtcctatactgttgtcgaccgagctcttgaccgtgaataa
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