Zingiber officinale (ginger): 122008396
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Entry
122008396 CDS
T08725
Name
(RefSeq) ABC transporter G family member 36-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122008396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122008396
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122008396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_25
AAA_16
ABC_trans_N
AAA
AAA_22
AAA_30
Rad17
AAA_23
AAA_18
nSTAND3
Zeta_toxin
RsgA_GTPase
AAA_28
AAA_33
NACHT
AAA_17
NTPase_1
AAA_11
RuvB_N
cobW
AAA_5
T2SSE
AAA_19
DO-GTPase1
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
122008396
NCBI-ProteinID:
XP_042420045
LinkDB
All DBs
Position
8A:complement(34177859..34184992)
Genome browser
AA seq
1478 aa
AA seq
DB search
MEPSEIGWLGSMRRSSGVWRGDDGVFSRSSRDGWEDGDDEEALEWAALEKLPTLDSVQHG
IVEISVDEGDCGGRLQEVEVKKLGYRERRALVERLVRVAEEDNERFLLKLRDRIDRVGLD
FPTIEVRYEHLSVEAKAHVGDRGLRTILNSAIDVFEDFANALRVLPSRKRPLSILHDVSG
IIKPRRMTLLLGPPGSGKTTLLLALAGKLSSELKSAGKVTYNGHEMHEFVPQRTAAYISQ
YDLHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAANIKPDPDLDVFMKAAATKGQ
ETNVITDYVLKILGLEVCADTLVGDEMLRGISGGQRKRVTTGEMLVGPARALFMDDISTG
LDSSTTFQIVNCLRQSIHILGGTAVISLLQPAPETYDLFDDIILLSDGQVVYQGPRENVL
EFFESMGFKCPERKGVADFLQEVTSRKDQQQYWARHNEPYRYVPVRGFSEAFQSFHVGRA
IVEELLVPFDGSKSHPAALTTTRYGVSNKELLLANIDRELLLMKRNSFVYIFRVIQLTIM
AMITMTVFLRTKMPHDSLDGGNIYMGALYFTILVTVFNGLSELAMTILKIPVFFKQRDLL
FFPTWSYTIPTWILKIPIAFIEVAVWVFTSYYVIGFDPKVERLFKQYLLLLAVNQMASGL
FRFVGAAGRNMIVANTFGSFAMLVLLVMGGFILSREQVKKWWIWGYWISPLMYSQNAIST
NEFLGQSWSQILPQTREPLGVIVLKLRGVFPEARWYWIGFAALVGYVLLFNFLFTMALTY
LKPFGKSQPPLSEELLREKTANLTGQVSEQSSKGRKFIGQSSSKRNIDGTRRVGSRNAAL
EQNKRGMVLPFTPLSIAFDNIQYSVDMPQEIKAQGVVEDRLVLLKGVCGSFRPGVLTALM
GVSGAGKTTLMDVLAGRKTGGYIEGSISINGFPKKQETFARISGYCEQSDIHSPHVTVYE
SLVYSAWLRLSNDVDSATRIMFVEEVMDLVELTSLRNALVGLPGVDGLSTEQRKRLTIAV
ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL
LKRGGEEIYVGPLGHHSCHLISYFEVGGIIILIEILFVETSDNCFLIPSKGIDGVRKIKD
GYNPATWMLEVTTQAQENILGVNFSDLYKSSELYQRNKSLIKELSKPPPGSSDLYFPTQF
SQSFIVQCIACLWKQRLSYWRNPPYTAVRIFFTTVIALMFGTIFWGLGTKRSRQQDLFNA
MGSMYASVLFIGVQNASSVQPVVAIERTVFYRERAAGMYSALSYAFGQVAIEVPYVLVQA
LIYGVIVYAMIGFEWTVAKFFWYLFFMYFTFLYFTFYGMMAVGLTPNYNIASIVSSAFYG
MWNLFSGFIIPRTQIPVWWRWYYWLCPIAWTLYGLVTSQFGDVEEKLEEGPTVAEFVRSY
FGFDRSFMGVVASVIVAFPVFFAFLFGFSIKMLNFQKR
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcgagatcggatggctggggagcatgcggcggagcagcggcgtgtggagg
ggcgacgacggggtgttctcccggtcgtcgagggatgggtgggaggacggcgacgacgag
gaggcgcttgagtgggcggcgctggagaagctccccaccctcgacagcgtgcagcacggc
atcgtcgagatctccgtcgacgagggagactgcggagggaggctgcaggaggtcgaagtc
aagaagttgggatacagggagcggcgggccctcgtcgagcgcctcgtccgcgtcgcggag
gaggacaacgagcggttcttgctcaagctcagggaccgcatcgacagggttggccttgat
ttccccaccatcgaggtgcggtacgagcacctgagcgtcgaggcgaaggctcatgtgggc
gacagaggcctgcgaaccattctcaactctgccatcgacgttttcgaggattttgcgaat
gctttgcgggtacttccaagtagaaagagacctttgtcaatccttcatgatgttagtgga
atcatcaaaccacgcaggatgactttactcttgggtcctccaggatcgggaaaaaccacg
ctgttgcttgcattggctggaaagcttagttccgaactcaagagcgctggaaaagtgacc
tacaatggtcatgaaatgcatgaatttgtccctcagcgaacggctgcatacatcagccag
tatgatcttcatatcggagagatgactgttcgcgaaacgttggctttttctgctagatgc
caaggagtcggtactcgttatgagatgttaactgagttagcaaggagagagaaagccgca
aacattaagccagatccggacctggatgttttcatgaaggcagctgcaacgaaaggacaa
gaaactaatgtgatcactgattatgtactcaagatactgggtttggaggtttgcgctgat
accctggtgggagatgaaatgctgcgaggcatttctggcgggcaaaggaagcgtgtcact
acaggtgaaatgcttgttggacctgcaagagctttattcatggatgacatatcaactggt
ctggatagttcaacaaccttccagatagtaaactgcctcaggcagtcaatccacattctt
ggtggaactgctgttatatctctgcttcagccagcaccagagacatatgacctttttgac
gacatcattcttctatctgatgggcaagttgtgtatcaaggccctcgagaaaatgtgctc
gaattctttgaatctatgggctttaaatgcccagagaggaagggtgttgcggacttccta
caagaagtaacatcgaggaaggatcagcaacagtactgggcacgccataatgaaccttat
agatatgttccagtaagaggattttctgaagcattccagtcatttcatgttggtcgggct
attgtggaggaacttcttgttccatttgatgggagtaagagccacccagctgctcttaca
actacaagatacggggtcagcaacaaggaattgttactagctaatattgacagagaattg
ttgctaatgaagagaaactcatttgtctacatcttcagagtgattcaacttaccatcatg
gcaatgattacaatgacagttttcctacgcaccaaaatgccccatgattctttagatggc
ggtaatatatacatgggagcactttactttacaatactcgtgaccgtttttaatgggctc
tctgaactcgccatgaccattttaaagattcctgttttcttcaaacaaagagatctccta
ttttttccgacatggtcatatacaataccaacatggattcttaagattcccattgcattt
attgaagttgcagtatgggttttcacgtcttactatgtcattggatttgatccaaaggtt
gaaagactgttcaagcaatatctcctgttactagcagtaaaccaaatggcatctggactc
ttccgtttcgttggtgcagcaggtaggaatatgattgttgcaaatacctttggatccttt
gcaatgctcgtccttcttgtgatgggtggtttcatactttcacgagaacaagttaaaaaa
tggtggatttggggttattggatatcgcctctaatgtactcgcaaaatgcaatatcaaca
aatgaattcttagggcagagctggagtcagatactcccgcaaacgagagagccactagga
gttattgtattaaagttgcgtggagtatttcctgaagcaagatggtattggatcggcttt
gcagccttagttggttacgtcttactatttaattttctttttaccatggctctcacttat
ctaaaaccatttgggaagtctcagccacctctttctgaagaattgttaagggagaaaact
gccaacctaactggacaagtgtcagaacaatcatccaaaggaaggaaatttattggtcaa
tcttcttctaagagaaatattgatggaacgagaagagtaggttcccgaaatgctgctctt
gaacagaacaagaggggaatggtcctcccattcaccccgctttctattgctttcgataat
atacaatattctgtggacatgccacaggaaataaaagctcaaggtgtagtagaagaccgt
ttggtgctcctaaagggagtgtgtggatcattcagaccaggagttcttacagctctaatg
ggtgtgagtggagctggcaaaacaacactcatggatgtattggctgggagaaaaactggt
ggatatatcgaagggagcattagcataaatggattccctaaaaagcaggaaacttttgcc
cgtatatcaggatactgtgagcagagtgacattcactctccccatgtgacggtttatgag
tctcttgtctactccgcatggcttcggttgtccaatgatgttgattctgcaacaaggatt
atgtttgtggaagaggtgatggaccttgtagaactgacatcactgagaaatgcacttgtt
ggattgccaggagttgatgggttgtcgactgagcaacgaaagcggctcactattgctgtg
gaacttgttgccaacccatcaattatattcatggacgaaccgacttctgggctcgacgca
agagctgcagctattgttatgagaactgtgaggaacacagtggatactggaaggactgtg
gtgtgcactattcaccagcctagcattgacatatttgaagcctttgatgagctcttccta
ttgaagcgaggtggcgaagaaatatatgtaggtccgctcggtcaccattcgtgccatctg
ataagctactttgaggtaggaggcataattattttgatagagatactctttgttgaaaca
tctgacaattgttttctgattccttccaagggaattgatggagttagaaagataaaggat
ggttacaatcctgcaacttggatgttggaagtgaccacacaagcccaagaaaatattttg
ggtgttaatttcagtgacttgtacaagagttcagagttgtatcagagaaacaagagtctg
ataaaggagctaagcaaacctcctcctggttcaagtgatctctattttccgacgcagttc
tctcagtctttcattgtgcagtgcatagcgtgtctatggaaacaacgcttatcgtattgg
aggaatcctccatacactgcagtgaggattttcttcacaacagtgatagcgttgatgttc
ggaactatattctggggccttggcaccaaaaggtctagacagcaagatttgtttaacgcg
atgggttcaatgtatgcctcagtgctatttatcggggtacagaatgcttcatctgttcag
ccagttgtggccattgaacgaacagtattttacagggaaagagctgcagggatgtattcg
gccttgtcatatgccttcgggcaagttgcaattgaagttccttacgttttggtccaagct
ttgatatatggtgtaatagtttatgcgatgatcggattcgagtggactgttgctaaattt
ttctggtacttgttcttcatgtacttcacattcctttacttcactttttatggaatgatg
gctgtgggcttgactcccaactacaacatcgcatccattgtttcttctgccttctatgga
atgtggaatctcttctctggattcatcattcctcgcacgcaaattccagtgtggtggaga
tggtattactggctgtgtcccattgcttggacactgtatggattggtcacctcccagttc
ggagatgttgaagagaaactcgaagagggtccgaccgtggcagagtttgtgaggagttac
ttcgggttcgaccgcagcttcatgggagttgtagcttcggtgatcgtcgcatttcctgtg
ttttttgcgttcctctttggattttcgataaagatgctcaactttcagaaaaggtga
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integrated database retrieval system
