KEGG   Zingiber officinale (ginger): 122008601
Entry
122008601         CDS       T08725                                 
Name
(RefSeq) autophagy-related protein 18a-like
  KO
K22991  WD repeat-containing protein 45
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:zof04131]
    122008601
Membrane trafficking [BR:zof04131]
 Autophagy
  Other autophagy associated proteins
   Others
    122008601
SSDB
Motif
Pfam: PROPPIN WD40_WDHD1_1st Beta-prop_EML_2 WD40 WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_EML Beta-prop_Vps41 WD40_MABP1-WDR62_2nd CPSF_A Beta-prop_HPS5 BCAS3_WD40 DUF7099 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_IFT80_2nd Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 122008601
NCBI-ProteinID: XP_042420319
LinkDB
Position
8A:complement(41020765..41029674)
AA seq 474 aa
MAAFSNPPLSSPSSPSPSPSSVSHPLLRSSSDRAADSSSLLASPPIVDPHPSPPQSIDPG
EEHVEIANSLQESESYEGLPSPAALRSILDSAAAATSLPSPPPVLAVPSSSPPRVVTYDD
DDDAVPLSLLHLSFNQDHGCFTAGTNRGFRIYNCDPFREIFRRDFDGGGIGVVEMLFRCN
ILALVGGGPNPCFPPNKVMIWDDHQSQCIGELSFRSEVLSVRLRRDRIVVVLDQNIFVYN
FTDLKLVHQIETVPNPKGLCAVSQHQGSLVLVCPGGQKGQVRIEQYGARQTKFIMAHDSR
IACLALSQDGRLIATASSKGTLIRIFSSVDGELLQEVRRGADRAEIYSLAFCSDMHWLAV
SSDKGTVHVFSLKINLGLTVNDKPRPAPVPNASISNSHLSFIKGVLPKYFHSEWSVAQFH
LQENSQYVTAFGHQKNTVVILGIDGSFFRCQFDPVTGGEMMQLECFNFLNPESL
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggctgcattctccaatccgcctctctcttctccttcgtccccctccccgtccccctct
tctgtttcccatcctctgctacggtcgagttccgaccgcgctgccgattcttcgtctctg
cttgcctcgcctcctatcgtggatcctcacccgtcgccaccccaatcgatcgatcccgga
gaagagcatgtcgaaatcgccaattccctgcaggagtctgaatcctacgagggtttgccc
tcccctgctgccttgcgttcgatcctcgactccgctgccgcagccacttcgcttccttcg
ccgcctccggtcctcgctgtcccgtcctcctccccgcctagggtagttacatacgacgac
gacgacgacgcagtgccgctgtcgctgctacacctatctttcaaccaggaccacggctgc
tttaccgccggcaccaataggggattccgaatctacaactgcgatccgtttcgtgagata
ttccgccgagattttgatggagggggtatcggcgtagttgagatgctgttccgatgcaac
attctggctctcgttggcggcgggccgaatccgtgcttcccgcccaataaggtgatgatc
tgggatgatcaccagagccagtgcattggggagctctcctttcggtcggaggtcctctct
gtccggctacggagggacaggatcgtcgtcgtgctcgaccaaaacatattcgtctacaat
tttactgaccttaagttggtgcatcagattgagacagtgccaaatcccaagggtctatgc
gccgtttcacagcatcagggatcgctggtgctggtctgtcctggtggtcagaaggggcag
gtcaggattgaacaatatggggcgaggcagactaagttcattatggcacacgattcaagg
attgcttgtttggcactgtcacaggatgggcgattgattgcaactgcaagttccaagggc
actcttattaggatatttagctcagtggatggggagcttcttcaagaagtaagaagaggt
gctgatagagcagagatatatagtttggctttctgttctgatatgcactggctagcagtc
tctagcgacaagggaactgttcatgttttcagtctcaagattaatttaggattgacagta
aatgataaacctcgccccgcaccagttccaaatgcttcaatttcaaattcacatctttct
ttcatcaaaggagtattgccaaaatatttccactctgaatggtcggtggcccagttccat
ttgcaagaaaattcacaatatgtaacagcatttggccaccaaaagaatactgttgttatt
cttggtatagacgggagtttctttcggtgccaattcgatcctgttacgggtggagagatg
atgcagttggaatgcttcaacttcctaaatccagaatctctctag

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