Zingiber officinale (ginger): 122008620
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Entry
122008620 CDS
T08725
Name
(RefSeq) serrate RNA effector molecule-like
KO
K27103
serrate RNA effector molecule
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zof03019
]
122008620
Messenger RNA biogenesis [BR:
zof03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
122008620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
Motif
Other DBs
NCBI-GeneID:
122008620
NCBI-ProteinID:
XP_042420349
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Position
8A:41975442..41981120
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AA seq
725 aa
AA seq
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MAEVMDAPSEALDRHRDSQPENTRSRSTSPLLPPPPPPRKSDLDSRERIDGPQDDRDCYP
PLLPPPPSGAPKDERDREYRRRSSPSPPSYRDRRRSPPRRSPPHRGSFKRARRDDGGYDR
RRGSPRGGYGLDDRRYGYDYGVGYERGGGRYGDERSHGRYLNRSPDWPDSGLGGYVDGPE
VTQRGGLMSYKHFIQELEDDISPTEAERRYEEYRSEYISTQKRAYFEAHKEEQWLKDKYH
PTNLVAVIEKRKERARFIAKEFLLDLQSGTLNLGPGLTAPPFSKSGYSSEPNSEDESDPS
GKRRRYNRGMTRENDLVSDAPKAHKVTSEPRRIQVDIEQAQALVRKLDLEKSIQDNILSS
SSHDMLDAEKSHGGSMGPIIIIRGLTTVKGLEGVELLDTLLTYLWRVHGLDYYGMSETSE
PNGLRHVRADLKTADGNDAGGSGWETKLDSLWQARLQGQDPLEILTAKEKIDAVASEAID
PLVRKIRDEKYGWKYGCGAKGCTKLFHAPEFVHKHLRLKHPDLVIDLTSKVREELYFQNY
MNDPNAPGGTPIMQQSQPKVKMQRRRPPLDNRLSDERSNRRDFDRQDRDADRHDRLDNSS
RDANGGSDGSHHDKPSYETYAGQGVHGALPSDVPAPPILVPVPGAGPLGPFVPAPPELAM
RMMREGGGPSSFEPNGGPRGRKERLGPSPILPLPPVFRPDPRRLRSYRDLDAPEDEVTVV
DYRSL
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtcatggatgcgccctccgaggcccttgatcgacaccgggatagccagccg
gaaaacacgcgtagcagatccacctcccctcttctcccgccgccgccgcctccgaggaag
agcgatttagattccagggagaggatagatggcccacaagatgaccgtgactgctatccg
cctcttctcccgccgcctccgtctggagctcctaaggacgaaagggaccgagagtatcgc
cgcaggagtagccccagccctccgtcgtaccgtgatcgcaggcgctcgcctccgcgacgg
tcccctcctcatcgggggtcgtttaaaagagcaaggagggatgacggtggatatgatcgt
cgtcgcggtagccctagaggaggttatggactggatgacagaaggtatggatatgattat
ggcgttggatatgaacggggtggaggaagatacggagatgagaggtctcatggccgttat
ctaaatcgttcacctgattggcctgattcaggacttggtggctatgttgatggccctgag
gttactcagaggggaggtctgatgtcatacaaacattttattcaggaactcgaagatgat
atttcacctaccgaagctgagcgcaggtatgaagaatacagatctgaatacatctccact
cagaaaagagcttattttgaagctcacaaggaagaacaatggctgaaagacaaatatcat
ccaactaacttggttgctgtgattgagaagaggaaggaacgagctagatttatagcaaag
gagttcttgcttgatttgcagagtgggacacttaaccttggccctggcctaacagctccc
ccatttagcaaatctgggtatagcagcgagccaaactctgaagatgagtcagaccctagt
ggcaaaaggagaagatacaatagaggaatgacaagagaaaatgatctggtttctgatgcc
ccaaaggctcacaaagtgacctctgagcctcggcgaattcaagttgacattgaacaagca
caagccttggttcgtaaacttgacctggagaagagtatccaagataatatcctctcgagt
agcagccatgatatgctggatgcagagaaatctcatggaggatctatgggtccaatcatt
attatacgcggcctcacgactgtcaagggccttgagggtgttgaacttcttgatacgttg
ctcacctatttatggcgtgtccatggtctggattactatggcatgtctgagacatctgaa
ccaaatggtcttcgacatgtcagagctgatcttaagactgctgatggaaacgatgctgga
ggttctggctgggagacgaaactggattcattgtggcaagcacgattgcaaggccaggat
cccttggaaattctgactgccaaagagaaaattgatgcagtggcttctgaagccatagat
cctttggtgagaaagataagagatgaaaaatatggttggaagtatggatgtggagctaaa
ggttgcactaagcttttccatgctcctgaatttgttcataagcatctccgtttgaaacac
cctgaccttgttattgatttaacctcaaaagttagagaggagctttatttccaaaattat
atgaatgatccaaatgcacctggaggtacacctataatgcagcagtcacaaccgaaggtg
aaaatgcaaaggcgtaggcctccgttagataatcgcctgagcgatgaacgtagcaatcgc
cgagattttgacaggcaggatagagatgctgacaggcatgataggttggataactcatct
cgtgatgccaatggtggctcggatggcagccatcatgacaagccttcatatgaaacttac
gcgggacaaggtgtacatggagctcttccttcggatgttcctgcaccgcctatcttagtt
cctgttcctggtgctgggccactaggtccttttgtccctgccccaccagagttggcaatg
cgcatgatgagggagggtggtggaccgtcatcatttgaacctaatggcggccctcgtggc
aggaaagaaagacttggtccatctccaattcttcctctgcccccagtgttccgaccagat
ccacgtcgcctaagaagctaccgagatcttgatgctccggaggatgaagtgactgttgtg
gattacaggagcttgtag
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