Zingiber officinale (ginger): 122008630
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Entry
122008630 CDS
T08725
Name
(RefSeq) EH domain-containing protein 1-like
KO
K12483
EH domain-containing protein 1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122008630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122008630
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122008630
Membrane trafficking [BR:
zof04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122008630
Exosome [BR:
zof04147
]
Exosomal proteins
Proteins found in most exosomes
122008630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EHD_N
Dynamin_N
EH
EF-hand_7
EF-hand_1
MMR_HSR1
EF-hand_6
GTP_EFTU
EF-hand_8
EF-hand_5
TsaE
DUF5388
Motif
Other DBs
NCBI-GeneID:
122008630
NCBI-ProteinID:
XP_042420362
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All DBs
Position
8A:42274188..42279896
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AA seq
543 aa
AA seq
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MDIDSLPMRKHHAKIYQEWFSLADSDGDGRITGNDAIAFFAMSNLSRADLKQVWAIADSK
RRGYLGFKEFVSAMQLVALAQAGSEINQNTLSNADLDKLNPPLMEGLENLLCRNKASSVK
NEPEPEPSVNIQTQKPTLQWFGSKSAKTLPLSSVTSIVDGLKRLYLEKLKPLEVTYRFND
FACPLLTNSDFDAKPMIMLLGQYSTGKTTFIKHLLKSSYPGAHIGPEPTTDRFVVIMSGP
DERTVPGNTIAVQADMPFNGLTTFGSAFLSKFECSQMPNSLLEHLAFVDTPGVLSGEKQR
TQRSYDFTGVTSWFASKCDLILLLFDPHKLDISDEFKRVIASLRGHDDKIRVVLNKADQV
DTQQLMRVYGALMWSLGKVLNTPEVMRVYIGSFNDKPINEAAVGPLGKELFEKEQDDLLS
DLKDIPKKACDRKINEFVKRARAAKIHAYVISHLKNEMPAMLGKAKAQQKLIDNLEDQFA
KVQREYHLPAGDFPDVEHFKEVLSGYSIDKFEKLKPKMVQAVDDMLAHDIPQLLKTFRNP
YER
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgattccttaccgatgaggaagcatcacgccaagatctaccaggaatggttc
tccctcgcggattcagacggggatggacgcatcacgggaaatgacgccatcgccttcttc
gccatgtccaatttgtctcgcgccgatcttaagcaggtatgggccattgcagactctaaa
cggcgtggttatctgggcttcaaagagtttgtttcagcaatgcagcttgtggcgttagca
caagcaggcagtgagattaaccaaaatacactttctaatgcggatttggacaaattgaat
cctccacttatggaaggcctagaaaatttactttgtagaaataaggcttcatcagtgaaa
aatgaacctgaacctgagccatcggtgaatattcagacacaaaaaccaacattacagtgg
ttcggctctaaatcagcaaaaacgttaccattgagctcagttacttccattgttgatgga
ttgaagaggctatacctcgaaaagctgaaacctcttgaagttacctatcgtttcaatgat
tttgcctgccctttgttgacaaacagtgattttgatgctaagcccatgatcatgctcctg
ggccaatattccactggaaaaacaacattcattaaacatttactgaagtcaagttatcca
ggtgctcatatcggtccagaaccaaccactgaccgttttgttgtgataatgtccggaccc
gatgaaaggactgttcctgggaatactattgctgtacaagcggatatgcctttcaatggt
cttacaacgtttggatctgcatttttatcaaagtttgagtgctcacaaatgccaaattcg
ctgctggaacacttagcgtttgtcgatactcctggcgtactttctggagaaaaacaacga
actcaacgcagttatgacttcaccggtgttacttcatggttcgcatcgaaatgtgatctt
attcttcttttgttcgatccacataagctcgacatcagtgatgagttcaaacgtgttatt
gcctctcttcgtggccatgacgacaaaatacgtgtggtcctgaataaagcggatcaagtt
gacactcaacagcttatgagagtttatggtgcattgatgtggtcactcggaaaagttcta
aatactcctgaagtaatgcgtgtatacatcggttcgttcaatgacaaacccataaacgag
gcagcggttggtccacttgggaaggagctgtttgaaaaagaacaggatgatctcctttct
gatttgaaagatattcctaagaaggcttgtgatcgcaagatcaatgaattcgttaagaga
gctagagcagcaaaaattcatgcttatgtcattagtcaccttaaaaatgagatgccagcg
atgctaggcaaggcaaaggctcaacagaaactcattgataatcttgaggaccagtttgct
aaggttcagagggagtatcatctcccagctggggatttccccgacgtggagcactttaaa
gaagttttgagcggctacagtatcgataagtttgagaagctgaagcccaaaatggtgcag
gctgtggacgatatgcttgctcatgacatcccccaattgctcaaaactttcaggaaccca
tacgaacgctga
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