Zingiber officinale (ginger): 122008642
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Entry
122008642 CDS
T08725
Name
(RefSeq) putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zof01009
]
122008642
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122008642
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zof04040
]
122008642
Protein phosphatases and associated proteins [BR:
zof01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122008642
Membrane trafficking [BR:
zof04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122008642
Ion channels [BR:
zof04040
]
Chloride channels
Chloride channel (CLC)
122008642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
122008642
NCBI-ProteinID:
XP_042420373
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All DBs
Position
8A:42484327..42499927
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AA seq
794 aa
AA seq
DB search
MEAEELVNGDGDDLEAALLSVDSQLEEHHHPRSIRRFASNTTSQLAIIGSNLCPIESLDY
ELIENDFLKQDWRSRGAARIVQYVILKWTLCFLVGALSGAVGFFNNLAIENIAGVKFVVT
SNMMLDGKYWRAFGVFAGSNFLLVIFASAITAFISPAAAGSGIPEVKAYLNGVDAPHIFS
LNTLCVKVAGSIAAVSSSLYVGKAGPMVHTCACIASILGQGGSRKYKLTCAWLRYFKNDR
DRRDLVTCGAGAGMAAAFRAPVGGVLFALECVSSWWRSALLWRAFFTTAVVAVVLRVLIN
ICRSGKCGLFGKGGLIMFDVTSEDVPYHLVDLTLVVLLGVIGGIFGSLYNFLLDKVLRFY
TLIHQKGHVYKFLLAASVSIFTSCCLFGLPWLASCKPCPAGLAEACPSIGRSGNFKKFQC
APGHYNDLASLFFNTNDDAIRNLYSLNTDTVFQKSSVFLFLVTTYFLSIISYGLALPSGL
FVPVILSGATLGRLTGILMGSHATLNNGLFAVIGSASLLSGTMRMTVSVCVIMLELTNNL
LLLPLLMLVSLISKTVADAFTANIYDLIVKLKGLPYLESHAEPYMRQLTVGDVVGGPLQV
FNSVEKVGNIVHVLKATGHHGFPVVDEPPISDSPVLLGLILRSHLLVLLKKKQFVHTRAI
SSIDTTKEFSADDFAKRGSGKNELIDAIELTAEEMNMYVDLHQFMNTSPYTVVETMSLAK
ALMLFREVGLRHLLVIPKSTSGMPIVGILTRHDFMPEHILGLHPCILKNKWKKLRFGRLS
MVKIFNDLRDWFKK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggaagagctcgttaacggcgacggagacgaccttgaggctgctcttctctct
gtcgattcgcagctggaggaacaccaccacccccgcagcattcgccgcttcgcctctaac
accacctcgcagctcgccattatcggctccaacctctgtcccatcgaaagcctcgactac
gagttgatcgagaatgacttcctgaagcaggactggcgcagcaggggggcggcgcgcatc
gtgcagtacgtcatcctaaagtggactctctgcttcctcgtcggtgccctctccggcgcc
gttggtttcttcaacaacctcgccatcgagaacatcgccggcgtcaagttcgtggtcacc
tccaatatgatgctcgacggcaagtattggcgggctttcggtgtgtttgcggggtcaaat
tttctgctcgtcatctttgcttcggccatcaccgccttcatctcgccggcggcagccgga
tcagggattccggaagtgaaggcctatctgaatggcgttgatgctcctcatattttctca
ttgaatacgctatgtgtcaaggtagcaggtagcattgctgcggtctcctcatctctctat
gtgggcaaggctggtcccatggtgcacacgtgtgcttgcattgcatccatacttggacag
ggcgggtctcggaagtacaagttgacttgcgcatggttgaggtactttaagaacgacaga
gaccgacgggatcttgtcacctgcggagctggtgctggtatggctgctgcttttcgcgca
ccagttggtggcgttttgttcgcgctggaatgtgtatcatcatggtggcgaagtgcactg
ctatggagagccttcttcactacagcagtcgttgcggttgtgctcagggtgctaatcaat
atttgtagaagcggaaaatgcgggttatttgggaagggtggccttatcatgtttgatgtc
acttcagaggatgtcccttatcacctagtcgacttaactctagttgtccttctaggagta
ataggaggaatcttcggaagcctgtacaatttcctgctcgacaaggttcttagattctac
actcttattcatcagaaaggccatgtctacaaatttcttctagctgcttcagtttccata
ttcacctcatgctgcctatttggattaccttggctcgcatcttgtaagccttgcccggct
ggattagcagaagcttgtccatcaataggcaggtctggaaatttcaagaagtttcagtgt
gctcccggccattacaatgatttagctagtttatttttcaacacaaacgatgatgcgata
agaaacctctacagtctcaacaccgacactgtgttccagaaatcttcggtctttttattc
ctcgtgacaacttattttcttagcatcatcagctatggcttggcacttccctccgggctt
ttcgtgcctgttattttgtccggtgcaactttaggacgtcttaccggtatcctcatgggt
tcacatgcaactcttaacaatggtctctttgcggtcattggctcagcttcccttcttagt
ggtacaatgagaatgactgtttcggtctgtgtaattatgctagaactaaccaacaatctc
ctacttcttcctctgctcatgctggtttcactgatatcgaagactgtagctgatgctttc
actgccaacatctacgacctgatcgtgaagttgaagggtctgccttaccttgaatcacat
gccgagccatatatgaggcagctcacggtcggtgatgtggttggaggccctttgcaagta
ttcaacagtgttgaaaaagtcggcaacatagttcatgtgctcaaggccactggtcatcat
ggcttccctgtggtagatgagcctcccatttctgattcacctgtacttctcggcctcatt
ctccgttcgcatttactcgttctgttgaagaagaaacagtttgttcatactcgagcaatt
tcgagtattgacactacaaaagagttctcagctgatgatttcgctaagcgtggctctggt
aaaaatgagctcatcgatgccattgagctgactgctgaagagatgaatatgtatgttgat
ttgcatcagttcatgaatacttcaccttatactgttgtcgagacgatgtcgttggcgaaa
gctctcatgcttttccgtgaagtcggcctgaggcatctcttggttattccgaagtccact
tcggggatgcctatcgttggcatattgacaaggcatgattttatgccggagcatatactt
gggctgcatccttgtatactaaagaacaaatggaaaaaactacggtttgggagattaagc
atggtgaaaatttttaatgatcttcgtgattggttcaagaaatga
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