Zingiber officinale (ginger): 122008655
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Entry
122008655 CDS
T08725
Name
(RefSeq) probable diaminopimelate decarboxylase, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00300
Lysine biosynthesis
zof00470
D-Amino acid metabolism
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01230
Biosynthesis of amino acids
Module
zof_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
122008655
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
122008655
Enzymes [BR:
zof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
122008655
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
122008655
NCBI-ProteinID:
XP_042420394
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Position
8A:42589402..42596575
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AA seq
480 aa
AA seq
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MAAAQLFSRASISPQIPHKPTAAALSLYPSLRFPAFPRLKTLALRAVSSQAPRAAEATEF
RHCFSKGEDGFLYCDGVRVQDVMEGVERSPFYLYSKDQITRNVEAYKEALQGLRSVVGYA
IKANNNLKILEHLRGLGCGAVLVSGNELRLALAAGFDPKRCIFNGNGKMLEDLVLAAEKE
VFVNVDSEFDLENIVTAARVVGKRVPVLLRINPDVDPQVHPYVATGNKTSKFGIRNEKLQ
WFLDAVKTHSSEINLVGVHCHLGSTITKVDIFRDAAVLMVNFIDQIRAQGFQLEYLNIGG
GLGIDYHHTGAVLPTPMDLINTVRELVLSRDLTLIIEPGRSLIANTCCLVNKVTGVKTNG
TKNFIVIDGSMAELIRPSLYGAYQHIDLVSPPAADAHVATFDVVGPVCESADFLGKDREL
PTPAKGTGLVVHDAGAYCMSMASTYNLKLRPPEYWVDNGSVVKIRHGEKMEDFTRFFDGL
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgcagctcttctcccgcgcttccatttccccacaaatccctcacaagccc
actgccgcggcactctccctttatccatcactacggttcccagctttcccccggttgaaa
accctcgctttgagggcagtcagttcccaagccccccgcgctgccgaagcgacggagttc
cgccattgcttctccaagggagaggatggattcctctactgcgacggcgtccgtgtccag
gatgtcatggagggggtcgagaggagccccttctacctctacagcaaggatcagattacg
agaaacgtggaggcgtacaaggaggctctccaggggctgaggtccgttgttgggtacgcc
atcaaggctaataacaatctcaagatattggaacacctcaggggattgggctgtggcgct
gtgctcgtcagcgggaacgagctcaggcttgccttagcggctggatttgatccgaaaagg
tgtatattcaatgggaatggcaagatgctggaggatcttgttttagctgctgaaaaggaa
gtttttgtgaatgttgatagtgagtttgacttggaaaacattgtgacagcggcaagagta
gtaggaaagagagtgcctgttctacttagaatcaatccagatgtagatccacaggtacat
ccttatgttgccactggaaataagacatccaaatttggtatccgaaatgagaaacttcaa
tggtttcttgatgctgtcaagacacattcaagtgaaattaatcttgtaggagttcattgc
catcttgggtcgactattacaaaggtggatatatttagagatgctgctgttctgatggtg
aatttcattgatcaaatccgagcacaaggcttccagttggagtacttgaatattggaggc
ggtcttggaattgattaccatcataccggtgcagtccttcctacacctatggatctcata
aacactgtgagagagctggttctttcccgtgatcttactctcatcattgaaccggggaga
tcactgatcgccaatacttgctgcttggttaacaaggtgactggtgttaaaactaatggc
acaaaaaactttatagtgattgacggaagcatggcagagctcatccgacctagtctctat
ggagcataccagcacatagatctggtttctccaccagctgctgatgcacacgttgcaacc
ttcgacgtggtggggcccgtgtgcgagtctgcagactttctgggcaaagacagagagcta
ccaacaccagctaagggaactggtttagttgttcacgatgctggtgcatattgcatgagc
atggcttcaacttacaacctcaaacttcgcccacctgagtattgggtggacaatggatct
gtggtgaaaattaggcatggagagaagatggaagacttcacgaggttctttgatgggctt
taa
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