Zingiber officinale (ginger): 122008753
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Entry
122008753 CDS
T08725
Name
(RefSeq) autophagy-related protein 18c-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122008753
Membrane trafficking [BR:
zof04131
]
Autophagy
Other autophagy associated proteins
Others
122008753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_Prp19
Beta-prop_IFT140_2nd
BCAS3_WD40
Beta-prop_Vps41
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
WDR55
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
122008753
NCBI-ProteinID:
XP_042420527
LinkDB
All DBs
Position
8A:complement(44936704..44948277)
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AA seq
415 aa
AA seq
DB search
MMSSTVTSPGIHPPMRIASLEAPQSWPPTIPFSQPEPESDDGNENELLSVSWNQDYGCFA
VGTSNGFRIFNCDSFKETFRRDLRSGGFGIVEMLFRSNILALVGGETNIQYPPNKVIIWD
DHQSRCIAEFSFKFNVRGVKLRQDRIVIVLENRIYVHDFKDLKLLHQMETISNPKGLCCL
SHHSNTFVMACPGLRRGEIRIEHFGLNVTKQINAHDSRISCMSLTLDGLLLATASSKGTL
IRIFNTMDGTRLQEVRRGLDKADIYSIALSPNVQWLVVSSDKGTVHVFSLRVRVGGEEAS
TQIVPFQSPAIVQQNSSTPFDPLSSPTAAANANSSLYFMRGVLPKYFSSEWSFAQFHLPE
GTRYTAAFGLHNSILIVGMDGSFYKCTLDPVNGGQMSQKEYVRFLKSDSQRCATR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctcaacagtaacatcccctggcattcatcctccaatgaggattgcctcatta
gaggcaccacaatcctggccaccaacaattccatttagtcaacctgaaccagaaagtgat
gatggtaatgaaaatgagctgctttcagtgtcatggaatcaagattatgggtgttttgca
gttggaacaagcaatggattccggatattcaattgcgacagtttcaaggaaactttcagg
agggatttgagaagtgggggctttggaattgttgaaatgttatttcgttcaaatattctg
gctctggttggtggtgagacaaatattcagtacccgcctaacaaagtaataatctgggat
gatcatcagagtcgttgtattgctgaattttcatttaaatttaatgtaagaggtgtgaaa
ttgagacaagatcggattgtcatagttcttgagaacaggatctatgtacacgatttcaaa
gacttgaagcttcttcatcaaatggagactatatctaatccaaagggactttgctgcctc
tcacatcattctaacacttttgtgatggcatgccctggtctacgccgtggagaaattcgg
attgaacattttggtctgaatgtgacaaaacaaattaatgctcatgattctcgcatatct
tgcatgtctttgaccttggacgggcttcttcttgcaactgcaagctcaaagggtacactt
atcagaatattcaatacaatggatggtactcgactacaagaggtacgcagaggactagat
aaggctgacatatatagcattgccctctctccaaatgtgcagtggctggtagtctccagt
gataagggaactgtacatgtgttcagccttcgagttagagtgggtggagaagaagcctcc
actcagattgtaccttttcaaagtccagcaattgtacaacagaactcttccactccgttc
gatcctctatcatctccaaccgctgcagccaacgctaactcatcactgtactttatgaga
ggtgtgctcccaaagtatttcagttctgaatggtcatttgctcagtttcacttgccagaa
ggcactcggtatactgctgcattcggacttcataatagtattctgattgttggcatggat
ggaagtttctataagtgtaccttggatccagtgaatggtggccagatgtcccaaaaggag
tatgtcaggtttctgaaatctgattcccaaaggtgtgccaccagatga
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