KEGG   Zingiber officinale (ginger): 122008764
Entry
122008764         CDS       T08725                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03010  Ribosome
zof04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    122008764
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122008764
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:zof03011]
    122008764
   04121 Ubiquitin system [BR:zof04121]
    122008764
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zof04147]
    122008764
Ribosome [BR:zof03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    122008764
  Archaea
    122008764
Ubiquitin system [BR:zof04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122008764
Exosome [BR:zof04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122008764
  Exosomal proteins of colorectal cancer cells
   122008764
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD UBL_UBAC1 DUF2604 Fer2_3 Ubiquitin_5 Thioredox_PDIA6_C OTU1_UBXL
Other DBs
NCBI-GeneID: 122008764
NCBI-ProteinID: XP_042420539
LinkDB
Position
8A:45399644..45400374
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSTGKVTRLRK
ECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAQGE
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatattcgtgaagaccctcacgggaaagacgatcaccctcgaagtggagtcgtcg
gacaccatcgacaacgtcaaggcaaagattcaggacaaggaagggattccgcccgaccag
cagcgcctaatcttcgccgggaagcagctcgaggacggccgcactctcgccgactacaac
attcagaaggagtccactctccacctcgtcctccgcctccgcggcggcgccaaaaagcgc
aagaagaagacctacacgaagcccaagaagattaaacacaagaagaagaaggtcaagcta
gccgtgcttcagttctacaaggtcgacgactccaccggcaaggtcaccaggctgcggaag
gagtgccccaacgctgagtgcggcgccggcaccttcatggccaaccatttcgaccgccat
tactgcggcaagtgtggcctcacctacgtttaccagaaggcgcaaggtgagtga

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