Zingiber officinale (ginger): 122008891
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Entry
122008891 CDS
T08725
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X1
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00280
Valine, leucine and isoleucine degradation
zof00650
Butanoate metabolism
zof01100
Metabolic pathways
zof04146
Peroxisome
Module
zof_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
122008891
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122008891
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122008891
Enzymes [BR:
zof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
122008891
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
122008891
NCBI-ProteinID:
XP_042420725
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Position
8A:47840727..47854029
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AA seq
452 aa
AA seq
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MLSSNIFSKCGRWTTFFSIAFSPISNLTSSSKMPTLQDPLSLDSIPRSSDLGRLQRNTSK
VTKMDLGTCLTETRGCSRSNTSNEEYSRRRQQKDILHGDLLSGKILHTNRNPMILNILCD
SRRLQNYQNISYSSELELKGKTDKILKGMPRFVKIVEVGPRDGLQNEKLIIPTPVKVELI
QKLVSSGLSVIEATSFVSPKWVPQLADARDVMQSIPLIPGVKFPVLTPNLKGFEAAIASG
AKEVAVFASASESFSVSNINCSIEESLERYHKVVSAAKDLAIPVRGYVSCVVGCPVEGPV
PPKKVAHVAKRLYDIGCYEISLGDTIGVGTPGTVSPMLDAVMSVIPVDKLAVHFHDTYGQ
SLANIFAALQMGISVIDCSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVTTNVDLGKLM
VAGDFISKHLGRQSGSKVAIALSRVTAGASKM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcttcgaacattttctctaagtgcggaaggtggactactttcttctccatagcc
ttttctccaatttctaatttgacatctagttcaaagatgccaaccttacaagaccctctg
agtcttgacagcattccaagatcgagtgacttaggtaggcttcaaaggaacacttcaaag
gttactaaaatggatttgggtacttgcctaactgagactagagggtgcagtcggtctaac
accagcaatgaagaatatagtcggagaagacaacaaaaggatattttacatggagatctc
cttagtgggaaaatattacacactaataggaatccaatgattttgaacattttgtgtgat
tcacggcgtctgcaaaattatcagaatatatcctattccagcgaattggaactaaaagga
aagacagacaagatcctcaaaggtatgccaagatttgtcaagatagtagaagttggtccc
cgagatggattgcaaaatgaaaaactcattatacctacacctgtaaaagttgaattgata
caaaagttggtttcctctggactatctgttattgaggctacaagttttgtctctccaaaa
tgggtaccacagctagcagatgcaagggatgtcatgcaatcaattccactcatacctggt
gtcaaatttccagtcttgactccaaatctcaaaggttttgaagcagctattgcatctggt
gcaaaggaagttgctgtctttgcatcagcttctgagtccttttctgtgtccaacatcaat
tgcagcattgaagaaagtcttgaacgttaccataaagttgtttctgctgcaaaagacctg
gcaatacctgttcgtgggtacgtgtcttgtgttgtgggttgtcctgtagagggaccggtg
cctccaaaaaaggtggcgcatgtggctaaacggctttatgatattggttgttatgaaatt
tcacttggtgatacaattggagttggtactccaggcaccgtaagtccaatgcttgatgct
gtaatgtctgtcatcccagtagacaagcttgctgtccatttccatgacacctacggccaa
tcactcgcaaatatattcgccgcgctccaaatggggatcagtgtaattgactgttctgtc
gctggactaggcggctgcccatatgcaaagggtgcctctggcaatgtcgccactgaagat
gttgtgtacatgcttaatggtctcggcgtaacaacaaacgtggatttagggaagcttatg
gttgctggtgacttcatttccaagcacttgggacgtcagtctggatcgaaagttgccatt
gctttgagcagagttaccgcaggggcctccaagatgtaa
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