KEGG   Zingiber officinale (ginger): 122008924
Entry
122008924         CDS       T08725                                 
Name
(RefSeq) histone deacetylase 5-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:zof03036]
    122008924
Enzymes [BR:zof01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     122008924
Chromosome and associated proteins [BR:zof03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     122008924
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 122008924
NCBI-ProteinID: XP_042420772
LinkDB
Position
8A:complement(48505091..48524348)
AA seq 691 aa
MAAPPGDNERPRVGLLYDERMCAHTTPDGEIHPECPERIRSIWKKLESEGIPQRCIILDA
KMAEDKHIAYVHSAKHIKLIKSISSKEFDSRRQRIASKFNSIYLNKGSSEAAYLAAGSVI
EVSEKVAKGDINSGIAIVRPPGHHAEPDEAMGFCLFNNVAIAANFLLNEKPELGIKKILI
VDWDVHHGNGTQKMFYDDPRVLFFSVHRFDYGSFYPSGDDGAYFMIGEGPGAGYNINIPW
EHGQCGDSDYVAAWDHILIPVAKAYNPDIILVSAGFDAAIDDPLGGCCVTPYGYSLLLEK
LMPFAQGKIVMALEGGYNLNSIANSVLSCAKILLHEEVVGSSRSPAFESTWDILKAVRHE
LKGYWPALNIKLPQSLLASRGRPRPPEVTYSSSESEVEMDKGINTAENVEDGKFAEDLIL
PLSKLDLDEDCDGINASSKLQIEGHSSQCESCHDPQTLIPSDIIASSFTWRSSLSKIEVW
YASYGSNMWKPRFLCYIEGGKVQGMTVPCSGSLDKSLPRSIIWKVLPHRLLFGRSYTRTW
GKGGVAFLNPERDTSEKAHLCMYRITLEQFNDVLAQENSLHQEDGAIQRMVSPLLDVDIL
NYVAKNKSTRLETIKDGWYSTVLYLGEEDNVPILTMTCSASDIQCFKSGEFPTSAPSRDY
MNTLVNGLVEGKQLTEAAATAYVDDAASRRL
NT seq 2076 nt   +upstreamnt  +downstreamnt
atggcagctccaccgggcgacaacgagcggccgcgtgtcggtctcctctacgacgagcgg
atgtgcgctcacacgacgcccgatggtgagatccatcccgagtgtccggagcggattcga
tccatatggaagaagctcgagtccgaggggatccctcagagatgcataattctggatgct
aagatggccgaggacaagcacattgcatatgtccatagtgcgaaacacatcaagttgatc
aagagtatcagctctaaggaatttgattctcgacgtcagagaattgcttcaaagttcaac
tctatatatctcaacaagggttcatctgaagctgcttaccttgcagcaggatcagttatt
gaagtctctgagaaggttgctaaaggtgatatcaattctggtattgctattgttaggcct
ccaggacatcatgcggaacctgatgaagctatgggtttctgcctcttcaataatgtggca
attgcagctaattttcttttgaacgagaagccagagttgggcataaagaagatattgatt
gtggattgggatgttcatcatggaaatggcacccaaaaaatgttctatgatgatcctcgt
gtgttatttttctcggttcacaggtttgattatggaagcttctatccatctggtgatgat
ggtgcttattttatgattggggaaggaccaggggcagggtataacattaacattccctgg
gagcatggtcaatgtggtgattcagactacgtggctgcatgggaccatatattgattcct
gtagccaaagcatacaatcctgatattatcttggtttctgccggctttgatgcagccatt
gatgaccctcttggtggttgttgtgttacaccttatggttattcacttctattagaaaag
ttgatgccatttgcccaaggaaagatagtaatggccctggaaggtggatataatctcaat
tctatagctaactctgttctgagttgtgcaaaaatactgttgcatgaagaagttgttgga
tcttcacgcagtcctgcttttgaatctacatgggatatcctaaaagcggttcgacatgaa
ctaaaaggatattggcctgctcttaatatcaagctacctcagagcttactagctagccgt
ggaagacctcgcccacctgaggtaacctactctagttctgaatctgaggtggagatggat
aagggcatcaacactgcagagaatgtggaggatggaaaatttgctgaagatctgattcta
ccactttcaaaactggatctagatgaagattgcgatgggataaatgcttcaagtaaactt
caaatagagggacactcatctcaatgcgaatcatgtcatgatccacaaacactgatacca
agcgatattattgctagtagcttcacatggagatcttcattgtcaaaaattgaagtttgg
tatgcaagctatgggtcaaatatgtggaagccaaggttcttgtgctacatagaaggtgga
aaggtgcaaggtatgactgttccatgcagtggatcacttgataagagtttaccaagaagc
attatctggaaagttttgcctcatagattattgtttggaagatcttatacccgtacatgg
ggaaagggaggtgttgcttttcttaatcctgaaagggacacgagcgaaaaagctcacctg
tgcatgtatagaataacactcgagcagtttaatgatgtattggctcaagagaatagtctg
caccaagaagatggagcaattcagaggatggtatctccattgttggatgtagacatcctt
aattatgtcgccaagaacaagtctactcgcttggaaaccattaaggatggatggtactcc
actgttctttatttgggggaggaggataatgttccaatcttaacaatgacttgctcagcg
tcagatatacagtgtttcaagtctggtgagtttccgacatctgcgccttctagagactat
atgaacacgttggtgaatggtctcgtggaagggaagcaactcaccgaggcggcggccact
gcatacgtcgatgatgctgcctcgagaagattataa

DBGET integrated database retrieval system