Zingiber officinale (ginger): 122008972
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Entry
122008972 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase HOS1
KO
K16278
E3 ubiquitin-protein ligase HOS1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122008972
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122008972
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122008972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELYS
zf-C3HC4_3
Prok-RING_4
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
122008972
NCBI-ProteinID:
XP_042420850
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All DBs
Position
8A:complement(49259040..49266975)
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AA seq
975 aa
AA seq
DB search
MESARSERSPSSSDYGAGLRTRSLSPYQPPPDYGSAAVQDALEQLASTDLLELCNEAKVE
RCRATRDLSSCGRYVQHVLNSCGHASLCEECSKRCDACPICRKLITNANDGSRLSLRLYY
KCIEAGLISKEHDDRSQEREVSREYVFDDIQRLYSLFDVALGNNLASLVCHYVTDVCMNE
NAVSSDPVFAFLLDEVVVKDWCKSTFKHIVFNLRDIYSQGSEAVNMMQKFALHLSGLSNV
LEVMALSLRQTFAAQLTDLHLLLENVVKTKQHLEVMIWCARHRFLRDVQSRFSGSGNSKA
WSLDVLERKEAAIKRSWPESSIALVGSARKHDNTLFIEDALSNLAIEENYVQKQEELDIS
CLQDDNSPVLFLSKIDRASGNGCYPFQNLRAAADLLFLRGASNMVLAKQAIFLYYLFDRH
WTKPDTEWKCIVDDFALFFGISMHSVVESMVFYLLDNHTPQALQEAVHLLPEIAGPQTHP
KIAQVLLERGCPDVALSTLRCSGRDGCYNNTNLEKDYLQDDLVGEAVTVVRVRIECGLLT
EAFMCLRMYYSKAKEMSLKHVPNLRFSNPSNTEFWVYLSEVLVTEICHLCNRRNLIDRMI
ELPWNSDEEKHLHKCLFDYASQDPSSTCGSLLVVFYLQRHRFTEAYQVNCGLEKIEQTFL
ESASEEVGSRIRLICQWRAGLVDKSLSLLPEVERQKILTGDITDLGHFSSEAVKFPLVAD
LSNEKPNPTSLINSSMRTSVIRSKKSNPLSGSPVHNDDSESASMLPSVLQRKLLASFEST
SADANAVGTDGLSSSFPLTDGNPFSNGGNLRNMMQKTEFSRQSLKLHHSSKAKPVKDLNS
SATRVLKSEYHFHSESSFDVQPVDFPGQAANMEPSLGVTLADHNRNGFPNGSVQDLIESS
GNFNIPNGPLINLEKVHEYPLEFRKGETPEDNSFTVGGRWRSDESSEDEEDIELAKYTIG
SASSTRRRRPRLSRR
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggcgagatccgagaggtctccctcttcatcagattacggcgccggccttcga
actcgaagtctctctccttaccaaccgccgccggactacggaagcgccgccgtccaggat
gcattggagcagttagcatcaactgatctactggaactttgcaatgaagcaaaagtggag
cgttgtcgagcaacaagggacttgagcagttgtggtcgctatgtgcagcatgtgctcaac
tcttgtggtcatgcatctttgtgtgaagaatgcagtaagagatgtgatgcttgcccaatt
tgtagaaagttgataacaaatgcaaatgatggatctcgacttagtcttcgtctctactat
aagtgcatcgaggccggtcttatttcaaaagaacacgatgatagatcacaagagagggaa
gtcagtagggaatatgtgtttgatgatattcaacggttatattctctatttgacgtggca
ctaggaaacaatttggcttctttggtttgtcattatgttacagatgtttgtatgaatgag
aatgctgtatcaagtgacccagtctttgcttttcttctagatgaagtggtcgtgaaggat
tggtgcaaatcaacatttaaacatattgtgttcaatctccgtgacatttatagtcaggga
tctgaagcagtgaacatgatgcagaaatttgccttacatttaagtggcctttcaaatgtt
cttgaggtcatggcattgtcacttagacagacatttgccgctcaacttactgacttgcat
cttctcttggagaatgttgtgaaaacaaagcagcatttggaggtcatgatttggtgtgct
aggcaccgatttcttcgtgatgttcaatcacgattttctggctcaggcaattctaaagca
tggagtttggacgtccttgaaagaaaggaggctgcaatcaaacgatcatggcctgaatct
tcaattgccttagtaggttctgccagaaaacatgataacaccctttttattgaggatgca
ttatcgaatttggcaatagaagaaaactatgtgcagaaacaagaagaattggatatttca
tgcttgcaagatgacaattcaccagtattgttcttgtctaagatagatagagcaagtgga
aatggatgctatccttttcagaatctacgagctgctgctgatctactctttttacgtggg
gcttcaaatatggtgctcgcaaaacaagcaatatttctttattatctatttgatcggcac
tggactaagcctgacacagaatggaagtgcatagttgatgattttgccttattctttggt
atttccatgcactcagtggtagagtctatggttttctatcttttggacaatcatactccc
caggctttacaggaagctgtacatcttctccctgagatagctggcccacaaacacatcca
aagatagctcaagttctcttagagcgtggttgccctgatgttgcattatctactttacgt
tgcagtgggcgcgatggctgctataacaatacaaatctggagaaggattatttgcaggat
gatttagttggcgaggcagtaacagtggttagagttagaattgagtgtggacttctcaca
gaagcctttatgtgtctgagaatgtactattccaaagctaaagagatgagccttaagcat
gtaccaaatctaagattttccaatccttcgaacactgaattttgggtctacctcagtgaa
gttttagtaactgagatatgccacctctgtaataggaggaaccttattgacagaatgatt
gagctcccttggaactctgatgaagagaagcatctccacaagtgtctatttgattatgct
tctcaagatccttcatcaacatgtggcagtcttctagtggttttctatcttcagcggcat
cgtttcacagaggcatatcaagtcaattgtggtcttgagaaaattgagcaaacatttttg
gagtctgcaagtgaagaagtcggttctagaatacggttgatatgccagtggagggcagga
ttggtcgataaaagtctcagtttactccctgaggtagaacgacagaaaatattgactgga
gatatcactgacctaggacatttttcttcagaagctgtaaaatttcctttagtagctgat
ttatccaatgaaaagccaaatccaacttccctaataaattcttctatgcggacctctgtt
attcgttcaaagaaatctaatccactgtcaggaagtcctgtgcataatgatgactctgaa
tctgcaagcatgcttccatctgttctccaacggaaactccttgcttcatttgaaagtact
tctgccgatgcaaatgctgtaggtactgatggactatcatcatcgtttcctcttactgat
ggcaatccattttctaatggtggaaatcttagaaatatgatgcagaaaactgaatttagt
cgtcagtctttgaagttacaccacagttctaaggctaaacctgttaaagatctgaattca
agtgcgacaagagtgcttaaaagtgaatatcattttcacagtgaaagctctttcgatgtt
caacctgttgactttcctggccaagcggcaaatatggaaccctcgcttggagtcacttta
gcagaccacaaccgcaatggcttccctaatgggtctgttcaagatctaattgagagctca
ggaaatttcaacataccgaatggaccattgataaatttggagaaagtccatgagtatcca
ttggagtttcgaaagggggagacgcctgaagacaacagcttcactgtcgggggaaggtgg
aggtctgatgaatctagtgaagatgaagaggacattgagctggccaaatatactatcggt
agtgcttcctctacacgcaggagacgacccagactttcaagaagatga
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