Zingiber officinale (ginger): 122009104
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Entry
122009104 CDS
T08725
Name
(RefSeq) trafficking protein particle complex II-specific subunit 130 homolog isoform X1
KO
K20307
trafficking protein particle complex subunit 10
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122009104
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
122009104
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Foie-gras_1
NTS_TR130
bL31_N
TPR_2
TPR_1
Motif
Other DBs
NCBI-GeneID:
122009104
NCBI-ProteinID:
XP_042421058
LinkDB
All DBs
Position
8A:complement(54447742..54473099)
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AA seq
1253 aa
AA seq
DB search
MANYLAQFQAIKNTSDRLVVAVEDVSDLWPSVKEGLEKRLPLKKASLNNKTRNPVYVENL
QAEFILTTDSRLRSRFPQEQYLFWFREPYATIVLVSCEDLDEFKTILKPRLKLIVQNEER
EWFIVFVSKAHPNNDQATKNAKKVYARLEVDFNTRKRERCCKLDLNGVDASFWEDFDFKI
VESIRNTLDRRAQFYEEEIRKMSEQRLMPVWNFCNFFILKESLAFMFEMAHLHEDSLREY
DELELCYIETVSTPGKQRDFGGLEHGDDQAALLKPGFKPLSQIVQDDSFREFEFRQYLFA
RQVKLLFRLGRPLEVVMRGYSFIISFSKTLALHENTLPFCLREVWVISACLAIISSTSST
YDGLAAPDNEKEFYRLHGDLYSLCRIKFMRLAYLIGYGVEIEKSPVNSASLSMLPWPKPS
IWPAVPEDASAKVLAKEKLILQANPRMKHFNIQRKQLPLEPSSLLREANRRRASLSVGNL
SELIDYRQIDGSGIDGHQKFSPSTTNSMSRTYSGPNLESSLSLDRPMRISEVHVAAEHAL
ENTVTDPDLLKSLSSLEEFEQKYMELTKGAADNYHHSWWKRHGVALDGEIAALCFKHGNY
DLAAKSYEKVCALYAGEGWQDLLAEVLPNLAECQKILNDQAGYLSSCVRLLSLEDGLFLA
KERQAFQLEVVRLAHSEMKHPVPLDVSSLITFSGNPGPPLQLCDGDPGTLPVTVWSGFPD
DITLESLSLTLTNTLNTDEGVKTIKSSDAHILKPGRNVIKLDVPPQKPGSYVLGVLTGQI
GNLRFRSHNFSKGGPQDNDDFMSYEKPTRPVLKVLKPRTLVDISAAVSSALLMNELQWLG
LIVKPIDYSLKGSLLSIDTGPGLMIDESHTIDINEYAKTMEDKVHAHDSNTITENNTHPL
EPKQLYIENGKIALPDWASDTSTTLWFPVHAIDDRMARAASAVSCADSPHRQNMVDGMRT
IALKLEFGAFRNQIFERTIAVHFTDPFYVTTRVANKCNDGTLLLQATIHSQVKATLCLYD
AWLDLQAGFVHVRKENGRPVSSFFPLVISPSSTAGILFSICIDNMAIAADQNEVVQAESI
LNVMYGISGDRSNGAHSPTSLKLGSSDKLFFKVAIALQRPILDPCIAVGFVPFSSNCLRV
GQLINMKWRVERLKDLEASPSSSCKDEVLYEVDANPEIWMIAGRTMGHALLSNARGSRTE
ITVTCMPLVSGHVRPPQLGLPAMDDANISCNPPGPHLVCVLPPTLSSSYCIPA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattacctcgcccaattccaggccatcaagaacacctccgatcgcctcgtcgtg
gcagttgaagatgtgagtgacttgtggcctagtgtaaaagaaggtttagaaaaacgcttg
cctttgaagaaggccagtttaaataacaagacaaggaatcctgtctatgtggagaatctt
caggctgagttcatattaaccactgattcaaggttgcgtagccggtttccccaagaacag
tacctcttttggtttcgagaaccgtatgcaactatcgttctagttagctgtgaggacctt
gatgaattcaagacgatcctaaagcctaggttgaagttaattgtgcaaaatgaggaacgc
gaatggtttattgtctttgtatcaaaagcacaccccaataatgaccaagcaactaaaaat
gcaaagaaggtttatgcaagactggaggttgattttaacaccagaaaaagagaaaggtgc
tgcaaattggacttaaatggagtagatgcaagcttctgggaggactttgatttcaagata
gtggaatctatcagaaatacattagacagacgtgcccagttttatgaagaggaaataagg
aaaatgagtgaacaacgtctaatgccagtctggaacttctgtaatttctttattttgaag
gagagcttggctttcatgtttgagatggcacatctccatgaagattcattacgtgaatac
gatgagcttgaactttgctatatagaaacagttagtactcctggaaaacaaagggatttt
ggaggattggaacatggtgatgatcaggctgcattattgaagcctggattcaaaccttta
tctcaaattgtccaggatgattcattcagagaatttgagttcagacaatatttatttgca
cgccaagtgaagctactatttagattaggtcgtccattagaggtcgtgatgaggggctat
tcattcattatcagcttctcaaagacactggctttgcatgaaaacacccttcctttctgt
ttgcgtgaagtgtgggtgataagtgcttgcttagctattatcagttcaacttcgtcaact
tatgatggacttgctgcacctgataatgagaaggaattttatcgtttacatggagacctt
tattcactttgtcgcattaagttcatgagacttgcatatttgatcggttatggagttgaa
atagagaaaagtcctgtcaacagtgcttcgttaagcatgttgccctggccaaagccatct
atttggccagctgttccagaagatgcttccgctaaagtgcttgcaaaggaaaagctgatt
cttcaagcaaaccccagaatgaagcactttaatattcagagaaaacaattgccgttagaa
ccttcttcacttctacgagaagctaatagacgaagggcttccctttctgttggaaactta
tctgagttaattgattaccgtcaaatagatggttcaggtatagatggacaccaaaaattt
tctccaagtacaacaaattcaatgtcacgaacatactctggaccaaatttggaaagttct
ttgtcccttgatcgccctatgaggatatcagaagtccacgttgcagctgagcatgcactc
gagaatacagttactgatccagatttgttaaaatccttatcttctttggaagaattcgaa
caaaagtatatggaactaacaaaaggagctgctgataattaccatcattcatggtggaag
aggcatggtgttgcacttgatggagaaattgcagctttatgctttaaacatggaaattat
gatttagctgcaaagtcctatgagaaggtttgtgctctatatgccggggaggggtggcag
gacctcttggctgaagtcttgccaaaccttgcagagtgtcagaagatacttaatgaccaa
gctggatacctctcatcttgtgttcgcttgttgtctctggaggatggtttattcttggct
aaagaacgacaagcttttcagttagaggttgttcgtcttgcacatagtgaaatgaaacat
ccagtaccccttgatgtttcatcgctgatcacattttcaggcaatcctggtccaccactt
cagttatgtgatggagaccctggtacacttccagtaactgtttggagtggctttcctgat
gatattactttggagtctcttagcttgacacttacaaatactcttaatacagatgaaggt
gtcaagacaataaaaagttcagatgctcatattctcaaacctggtaggaatgtcatcaaa
cttgatgtgcctccacaaaagccaggttcctatgttcttggagttcttacaggacagatt
ggcaacttgaggtttagatcccataacttttcaaaaggtgggccgcaagataatgatgat
tttatgagttatgagaaaccaaccagacctgttctgaaggtgctcaagccaagaactcta
gtggatatttctgctgcagtatcatcggctttgttaatgaatgaactccaatggcttgga
cttatagtgaagccaatagactactctctcaagggttctcttttaagcatagatactggt
cctgggttgatgattgatgagtctcatacaattgatattaatgagtatgcaaaaacaatg
gaggataaagttcatgcacatgattccaacactattacagagaataacactcatcctcta
gaacctaaacagctttatattgaaaatggtaaaatagcattgccagattgggctagtgac
acaagtacaaccttatggtttccagtccatgctattgatgacaggatggcgagagcagca
tctgcagtttcatgtgcagatagccctcacaggcagaacatggttgatggcatgagaaca
attgccttgaaacttgaatttggagctttccgaaaccaaatatttgaaaggaccattgct
gtgcatttcactgacccattctatgtcactacaagggttgccaataaatgcaatgatggc
actttacttttgcaggcgacgatacactcccaagtaaaagctacattgtgcttatatgat
gcgtggttagaccttcaagctggatttgtgcatgtgaggaaggaaaatgggagacctgtt
tcaagttttttccctctcgtgatttctccatcttctactgcaggaatcttgtttagtatt
tgtatagataatatggctattgcagcagatcaaaatgaggttgtccaggcagagagtatt
ttgaatgttatgtatggaatttctggtgaccgaagtaatggagcacattcgcctacatca
ttgaagcttggaagcagtgacaaattattttttaaggttgctattgctttacagaggccc
attcttgatccatgtattgcagttggttttgttcctttttcttctaattgtctaagagtt
ggacaactgattaatatgaaatggagagttgaaaggctgaaagatctggaagctagccca
tcatcctcatgtaaagatgaggtgctttatgaagttgatgccaatccagaaatctggatg
attgctgggaggaccatgggacatgcactgttgtcaaatgcgcgaggttcaagaacagaa
atcacagtgacatgcatgccactggtttctgggcatgttcgtcccccccagctgggttta
ccggcaatggatgatgcaaacatcagttgcaatccaccaggacctcacttggtgtgtgta
ctgcctcccaccttgagctcttcttactgtattcctgcatga
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