Zingiber officinale (ginger): 122009189
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Entry
122009189 CDS
T08725
Name
(RefSeq) transcription factor LAF1-like
KO
K09422
transcription factor MYB, plant
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122009189
Transcription factors [BR:
zof03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
122009189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
122009189
NCBI-ProteinID:
XP_042421194
LinkDB
All DBs
Position
1A:111403188..111404253
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AA seq
246 aa
AA seq
DB search
MGCKMCEKVKVTYKRGLWSPDEDQKLKDYILKHGHGCWTSVALRAGLHRNGKSCRLRWMN
YLRPGLKRCAFTDEEESTVMKLHAIWGNKWSQIAMHLPGRTDNEVKNHWHTNLKKKLRKV
ENQKSEQVSNEHDSRNSVSESLLSQESTLTNSCHSMIEHANHQPRAYKLLFADWIPMFSG
NGSLNLDGGAMSRSTSNSEVLSPELSQLDMADSIIDWKDSIIPGGLQPVEQIPDVNFHDL
FDMLWY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcaagatgtgtgagaaggtaaaggtgacctacaagagaggattgtggtctcct
gacgaggaccaaaagctgaaggactacatcctcaagcacggccatggctgctggacctct
gtagcactcagagctggcttgcataggaatggaaagagctgcagattgaggtggatgaat
tacctgaggccaggactcaaacgctgtgctttcacagatgaagaggaatcgactgttatg
aaactgcatgccatttggggcaacaagtggtctcagatagcaatgcatctaccaggaaga
actgataatgaagtgaagaaccactggcacaccaacctcaagaagaaactccggaaagtc
gaaaatcagaaatctgaacaagtatcgaatgagcacgacagccgaaactctgtttcagaa
tccttgctctctcaagaatcaaccctcacaaattcttgccattccatgatagagcatgcc
aaccatcagcctcgtgcctacaaacttctttttgcagattggataccaatgttcagtggc
aatggctcattgaatttggacggtggagcgatgagtcgatccacctctaactctgaagtc
ttgagtcccgagctttctcagcttgacatggctgatagcatcatagattggaaagactcg
atcatccctggaggactacagcctgtggagcaaattccagatgtcaatttccatgatttg
tttgacatgctttggtattga
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