Zingiber officinale (ginger): 122009228
Help
Entry
122009228 CDS
T08725
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3-like
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zof03021
]
122009228
Transcription machinery [BR:
zof03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
122009228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
Motif
Other DBs
NCBI-GeneID:
122009228
NCBI-ProteinID:
XP_042421241
LinkDB
All DBs
Position
8A:complement(61062226..61070087)
Genome browser
AA seq
642 aa
AA seq
DB search
MGVEPQGNGFSVDGAEEGFISDSEAFASVINVLDGVRMAPSLVAQVDKEQYYYLVSVVNP
GRKIGPVDEALTVTALKALTRAVFKIDIMYHGALLNNIFLTSIWDYDLETRNAFLELITT
MATLPDKFLENCLHVLLCNFRPPNWLKAPFCHSKRWLMRKKEVHSELHLALHCITTLVPL
APVRLKCLIEKLMSRVTEDKYIMVTYVEGLLGLEKNEIGKFLGSTVMAKVVDLLTDLDVN
IPWEDILQEEQNKSVFVIELGDSNQDDEHSSIKQNGVLKCNVFADKLDGLMVVVCEHLKS
CADTGCLLEGFDRLSEIFRRAVLKLHKSKFTQFLIFYACSLDPDTCGLKFAILLTDIFVS
KDEDPDSRMKAVAYLASYLSRAKFISSSLVTSILQRLVDWCFEYCQLQESREKMISPQAD
RIFYSGCQAVMYILCFRLRSISDVPHLKQLLFHLPLDSILCHPTLDPLKVCLPLIVQEFL
RQASAARLFKKPMPYFYDDSFESEFSKAFGGIERLDMFFPFDPYLLKESDRFMRPNFEFW
DNVRTTYSNFDGDEVDDELEDLDVPNFPDDAGGYEVHNDIDFDNEDDIELPMSKMSITPK
PSFLHPIATNFSQPSLMPARIRPSQSPPSPRQGILSRREWRG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggaaccacaaggaaacggattttctgtagatggtgcagaggaggggttcatc
agtgattctgaggcttttgcttctgttataaatgttctcgatggtgttcggatggctcca
tctttagttgctcaggttgataaggagcagtactattacctggtttctgtggtgaatcct
ggaaggaaaattggaccagttgatgaagctttaacagtgacagcattgaaggcactaaca
agagccgtcttcaagatagacattatgtaccatggcgctctattaaataatatttttcta
acatccatatgggactatgatttggagacaaggaatgcattcttggaattgatcactaca
atggctacactacctgataaatttcttgaaaattgcttacatgtgcttttgtgtaacttt
cgcccacccaattggctaaaggcgccattttgtcactcaaaaagatggcttatgaggaag
aaagaagttcatagcgaacttcatttggcattgcattgtattactactttagtacctctt
gctccagtgaggctgaaatgtttaattgaaaaactgatgtccagagtcactgaagataaa
tatattatggtaacttatgtggagggtttgcttggactagaaaaaaatgaaattggaaaa
ttccttggaagcacagtaatggcaaaagtagtagatttgctcacagacttggatgtaaac
ataccttgggaagacattctacaggaagaacagaacaaaagtgtatttgtgattgaactt
ggagattctaatcaagatgatgagcattcttccatcaaacaaaatggagttttaaagtgc
aatgtttttgccgacaaattggatggcttgatggtggtagtttgtgagcatcttaaatcc
tgtgcagacactggttgtttattagagggatttgataggctctcagaaatctttcgaagg
gcggtgctaaaacttcacaagtcaaaatttactcagttcctgatattttatgcttgttcg
ttggatcctgacacatgcggtttgaaatttgctattctactaacagatatttttgtttca
aaagatgaagatccagattccagaatgaaggctgttgcgtatcttgcaagttatctatcc
cgggctaagtttatttcttcttccctggtcacaagtatacttcaaagattggtggattgg
tgttttgagtattgtcaattgcaagagagtcgggaaaaaatgatcagccctcaagcagac
cgaatcttttattctggatgtcaggctgtgatgtacattctatgttttcgattgcgatca
atctcagatgttcctcacctgaagcagctgctctttcacctgccactggattctatcctg
tgccatccaaccttggatcctcttaaggtgtgtttgcccttgatcgttcaagagttcctc
agacaagcaagtgctgcccggttgtttaagaaacccatgccttatttctacgacgactcg
tttgaatctgaattctcaaaggcttttggaggaatcgagcgtttggacatgttcttccca
ttcgatccatatcttcttaaagaatccgacagatttatgcgccccaattttgagttctgg
gacaatgtgaggacaacatacagcaacttcgacggggacgaagtggatgatgagcttgag
gaccttgatgttcccaatttccctgatgatgcagggggctacgaagtgcataacgatatt
gactttgacaatgaagatgacatcgaactaccgatgagcaaaatgtcaatcaccccaaag
cctagctttctgcacccgatagccaccaacttcagccagccttcgctgatgcccgcaaga
ataagaccgtctcaaagccctccatcacctcgacaagggattttatccaggagggagtgg
aggggttga
DBGET
integrated database retrieval system
