Zingiber officinale (ginger): 122009237
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Entry
122009237 CDS
T08725
Name
(RefSeq) methyl-CpG-binding domain-containing protein 9-like isoform X1
KO
K22768
methyl-CpG-binding domain-containing protein 9 [EC:
2.3.1.48
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122009237
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
122009237
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
122009237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
Bromodomain
FYRN
Phage_zn_bind_3
PHD_2
PHD-1st_NSD
DDT
WSD
Prok-RING_1
FYRC
KIAA2026_hel
zf-HC5HC2H_2
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
122009237
NCBI-ProteinID:
XP_042421251
LinkDB
All DBs
Position
8A:complement(61529903..61551916)
Genome browser
AA seq
2224 aa
AA seq
DB search
MDTSAAFEKPLEARQTPLFIDLNEAPPTPCDTHTAESPASLLDLDARAVACRFHGVLTPA
AGSAADFPGEAGVGTVLLRCGICGLLETRGGTVVCDGCETGFHVSCARNWLRQPMSALDD
WLCHECSENRRPIKRWSLGAARLLDINAMPPSEGDFEELHSNGIGGCGLNSSDGANISVT
YQLFQHHNVGHIRNDFDFVEGTETTDDSTRTITEEEKRFGQVHDLSQYFGMKSNFTCIEV
AEKSDVSGLVHRALPRRRKRDPARTWTATSSSENQDSMRASCGGEPSSDTEVMDSQFIDF
RRLLRASNAYADENNDLGSKNLIGWLPVQYEDFYVLSFGRIDLRMTYHDSSQIWPVGYRS
VWHDEITGSLFECEVSDGGNSGPVFKVQRHPCSASPLPVGETVLHYNSSRKSDAPETTES
SMIFESSLELDDDILILLSDPTYADQEMISCFNSNFHGISHESSMHMDAHEQHAIHHVDN
CSEEFEDSLKITSPRDEIGDFYVEGRSSLSVWKMVSQTFVDSCQEAYRQSGSLKFFCRHR
CQRTHYFGDGKQKTLDYPAALGKFCSPSGPINVPQVIRSDAELDSSCKSLAEWLNQDRFG
LDIEFVQEVIETFPESHACAGYQFLINKLDASKLMTVASGALLAVQRNGGRGKDKVFPCG
LYRRPTLSQPHDFTDEHQLTERQPPPGKPCSRRLPPELVGDVYQIFEFLCRFYETLGLNE
PPMFEELVEELIDPWPIDSMYGEREKLEREIQDYGELVAKSHDTLTSQNLLPTRGADTQA
LDVSPFMFIPNETASAREAVQAKLASRTYGRCTGVRLTKVHTSLLKLLIGEILGKVTFYM
DPNSDARESRSRRGRKKDLENTVTAKDPKTDILPANEFTWPDLARRYILVVLFMNFVMDS
PDIFAREGLKLIRCLQGDGGVLCSSLSGVAGMEADAVLLAEAEMQISDSGKQKHKVSIVG
HKDSVADGTSEPVVHGKNLPEWALLLEPVKKLPTNVGTRIRKCIYDALEHNPPEWAKKVL
EHSISKEVYKGNASGPTKKAVLSVLAEASGGKHLHKPEKKSKEKNPISLSDAVMRRCRMV
LRHALSADEEKVFCNLLGSPMANVNDNEDEGILGFPAMVSRPLDFHTIDLRLAVGAYGTS
HEAFLEDVQEVWHNLSIAYKDHSDLMQLVEELSVNFESLYEKEVLTLVEKIADPAGTESL
DPVKQKELYDILATSEMLKAPWEEGVCKVCGIDKDDDSVLLCDTCDSEYHTYCLNPPLAR
IPEGNWYCPSCVRIQSKKQDWNHHTLVSKNTERRYLGEGNRAFQEALKQLTCTMKERDYW
EYSIEERILLLKFLCDEVLSTGLIKEHLDQCNETSNDLQQKLRALVMDWKTLKFKEEILS
LNIARERTNKPGDSPREEEEEIASAGLAECQRNVSDTSVDADTGVIPETSTVESPVGQDG
QNDFRKNVDQFSKSMIDAHSDHGRKVEMQSGDQHTLDKGADSGNALYTVSLGQGNQIKQD
KGLSLISSDQEGKEGKEESIRGFDNETARRGLLGDDSSICERPDVTQNVGRPVVVLTHAD
TSHGSIMVTHRGTAQDNNILRTKRLINTSTEFLSSNQGDVNQGNTNVSHATSIENSLNNL
ELDTLKNQISHVELSISRVESQLMMTSLRRDFLGRDSFGRLYWAICRPGIRPWLVADGST
MVPEESSRMEELSQPKGNDLVDMVSPSSAPMSGPGGSDVCSTSACGSQKFSYYSFSLYEN
DNDIQEITSWLTSADPKEKELKDNILHWQRILHQVSNIISNDSHPTSKSSNSKDCMVSRC
LTTKAAMILEAKYGPFLELEAIEIPKRKGKKGKPSHDERMFRCECLEPVWPSRHHCLSCH
QTFSTEVELDGHNDGRCTPNNTGSDESKESNDQSKVKGIRSENVRGKDNHEEIDVGDSSE
KFFEFNSSFVRLSRTTCPYDFDLISKRFIVENSNKEIVQEIGLIGSNGIPSFVPSGAFFL
NSGEELSQSLNSNVNGSTALSFSSGVQFLLPRGRGRTGLNITEDEVRRGNGHASTSQNAF
DSVNDEQSQRIKRSTRGIGNEGEASSMTSNTQHAGISSGCTVPESSLKPVVGKTSEILKR
LKVNLLDMEAALPVEALRPSKLILQKRCAWRTFVKSLQSIFEMIQATTLLEGMVKTEYLK
NGWWYWSSQTAAARTSTVSSLALRIYTLDDCLTYTKNQDPGSNTIESDPKPANKAGKKRK
DMET
NT seq
6675 nt
NT seq
+upstream
nt +downstream
nt
atggatacttccgccgccttcgagaagcctctcgaggcgcgccagactccgctcttcatc
gacctcaacgaggctccgccgacgccatgcgacacccatacggcagaatcccctgcctct
ctccttgatctcgacgcccgtgccgtcgcctgccgcttccatggcgttctcacgcccgca
gccggatccgctgcggacttccctggcgaagctggcgtcggaactgttctgctccgttgc
ggtatctgcggcctactggagacgcgcggtgggacggttgtctgcgacggctgcgaaacg
ggtttccacgtgagctgcgcgaggaactggctgcggcaaccgatgtctgcgttggatgac
tggctctgccatgaatgcagcgaaaacaggaggcccatcaagaggtggagcctcggtgcg
gctaggttgctcgacatcaatgctatgccgcctagtgagggagattttgaagagctgcat
agtaatggaattggtggatgcggattgaacagctcagatggagctaatatcagtgtcacc
taccaattatttcaacatcataatgtgggccacataagaaatgactttgattttgtcgag
ggcaccgaaaccacagatgattccacaagaaccataactgaagaagaaaagaggtttggt
caggtgcatgatttatctcagtactttggcatgaaatcaaacttcacttgcattgaagtt
gctgagaaaagtgatgtttctgggttagtccatagagctttgcctcgtcgaagaaaaaga
gaccctgcaagaacctggactgctactagttcatccgagaatcaagatagcatgagggct
agctgtggcggagagccctcttctgatactgaggtgatggactctcagttcattgatttt
aggagattgttaagagcttcaaatgcttatgcagacgaaaataatgaccttggctccaaa
aatttaattggttggctcccggttcagtatgaggacttctatgtcctttcttttggaaga
attgatttgaggatgacataccatgacagcagtcagatctggcctgtagggtatagatca
gtttggcatgatgagattaccggatcactttttgagtgtgaagtatcagatggtggaaat
tctggacctgttttcaaagtgcaaaggcatccatgttcagcatcgccacttccagttggg
gaaactgttcttcactataacagttctagaaaatctgatgcaccagaaacaacagaaagt
agcatgatctttgagtctagcctagagctagatgatgatattttaatacttctatcagat
ccaacatatgcagatcaggaaatgatatcgtgcttcaatagtaactttcatggaatttca
catgaatcctccatgcacatggatgcacatgaacaacatgctatacatcatgtggataac
tgctcggaagagtttgaagattctttaaaaataacttctccaagggatgaaattggagat
ttttatgtggaaggaagatcgtcattatcagtatggaagatggtgtctcaaacttttgtt
gattcatgccaggaagcctataggcagtcaggttctctgaagttcttctgcagacacaga
tgccaaagaacacattattttggagatggaaaacaaaaaactctagattatcctgctgcc
ttaggtaagttttgcagtccttctggtcccatcaatgtaccacaagtcattcggagtgac
gcagagcttgattcttcatgcaaatcacttgcagagtggctaaatcaagacagatttgga
ttagatatagaatttgtacaggaagtgattgaaacttttcctgaatcacatgcatgtgct
ggttaccagtttctaattaacaagttagatgcttcaaagttgatgactgttgctagtggg
gcactcctagcagtacaaaggaatggtggcagaggtaaagataaagtttttccatgtggt
ttatatagaaggccgacactatctcagccacatgatttcaccgatgaacaccaactaact
gagcgccaaccaccaccaggaaaaccttgcagcagaaggcttccgccagagctggttgga
gatgtttatcagatatttgaatttctatgtcgtttttatgaaactttgggtctaaatgaa
cctccaatgtttgaggaacttgtggaagaacttattgatccctggcccatcgattcaatg
tacggggagagggagaagttggaaagggaaattcaagattatggggagttggttgcaaaa
tcacacgacactttaactagtcaaaatttgctaccgacacgaggggctgacacacaagca
ttagatgtaagtccatttatgtttattccaaatgaaacagcatcagcaagggaagctgtt
caagctaaattggcatcacgtacttatggcagatgtactggtgttagattgactaaggtt
catacttcactgctgaaacttttgattggagagatccttgggaaagttactttttacatg
gatccaaattctgatgctagagaatcaagatctagacgtggacggaagaaggatcttgag
aacacagttactgcaaaagaccccaagactgatatattacctgccaatgaatttacatgg
ccggatttggccaggagatatatcttggttgttttgttcatgaattttgttatggactcc
ccagatatctttgctcgcgaaggactgaagttgatccgctgcttacagggtgatggcggt
gtcctttgtagttccctatcaggtgttgctggtatggaagctgatgcagtgctgcttgca
gaggctgaaatgcagatatctgattctggaaagcagaaacataaagtctcgatagttggg
cacaaggattctgttgcagatggaacttctgaacctgttgtacatggaaaaaatcttcct
gaatgggcattacttctagaaccagtgaaaaagttgccaactaatgttggtacaagaata
agaaagtgcatttatgatgctctagaacataatcctccagaatgggcgaagaaagttttg
gagcattctataagtaaggaggtttataaggggaatgcctcggggccaactaagaaagct
gttctttctgtcctagctgaggcatcaggtggaaagcaccttcataagccagagaagaaa
agcaaagagaaaaatcctatatcattgtctgatgctgttatgagaagatgccgtatggta
ctccgtcatgctctttctgcagatgaagagaaagttttctgcaatttgcttgggtctcca
atggcaaatgtcaatgataatgaagatgaaggtattcttggatttcctgctatggtttct
cgccctttagattttcacaccattgacttaaggttggctgttggggcttatggtacttca
cacgaagcttttctagaggatgttcaagaggtgtggcataatttatcaattgcttataaa
gaccattctgatctgatgcagttagttgaggaattgtcagtgaattttgaatcactgtac
gagaaagaggtacttactctagtggagaaaattgctgatcctgctggtactgagtctctg
gaccctgtaaagcagaaagaattgtatgatattcttgcaacaagtgaaatgctcaaagct
ccttgggaagagggagtttgtaaagtctgtggcattgataaggatgatgacagtgttttg
ctttgtgatacttgtgactcagaataccatacatattgtttaaatcctcctcttgctcgg
attccagaagggaattggtattgtccatcatgtgttaggattcagtccaaaaaacaagat
tggaaccatcatacacttgttagcaagaacactgagagaagatatttgggagagggtaat
cgtgcttttcaagaggccttgaaacaacttacatgcacaatgaaagagagagactattgg
gaatacagtattgaagagagaatattgctgctgaaatttctgtgtgatgaggtgctgagc
actggacttattaaggaacacctagatcagtgtaatgaaacgtcaaatgatttgcagcaa
aaattgcgagcactagttatggactggaaaactttgaaattcaaggaagaaattttgtct
ttgaacattgcaagagaacgtactaataaacctggcgacagcccaagggaagaggaagaa
gaaattgcatctgctgggctagctgagtgtcagcggaatgtcagtgacacttctgtagat
gctgatactggtgtcattcctgaaacttcaacagtggagtcccctgttggacaggatgga
caaaatgatttcagaaagaatgtggatcagttttctaagagtatgattgatgctcattct
gatcatggtaggaaagttgagatgcagtctggtgatcaacatactctagacaagggtgca
gattctggtaatgcactctacactgtttcacttggtcaaggaaaccaaataaaacaagat
aaagggctatcactaatttcttctgaccaagaaggtaaggaaggaaaggaagaatctatt
cgtggttttgataatgaaactgcacggagagggttgctgggtgatgacagcagcatctgt
gaaagacctgatgtgacacaaaacgttggaaggccagtagtagtacttacccatgcagac
acatctcatggttctattatggtcactcatagaggtacagcacaggataataatatttta
aggactaagaggctaatcaatacatcaacagagtttctctcctccaaccaaggtgatgta
aaccagggaaacaccaatgtttctcatgccacatctattgagaacagtctcaacaatctt
gaactggatactttaaagaatcaaatttcacatgtggagttgtcaatttctagagtagaa
tctcagcttatgatgacatctttaagaagggattttcttggaagggattcttttggtcga
ttatattgggctatatgcagacctggtattcgtccttggctggttgctgatggaagcaca
atggtaccagaagagagtagtcgaatggaagagttaagccagcccaagggtaatgacctt
gtggatatggtctccccaagttcagcaccaatgtctgggccaggtggatctgatgtatgt
agcacatctgcatgtggttcgcaaaagtttagctattattcattttctttgtatgaaaat
gacaatgatattcaggaaattactagttggctgaccagtgctgaccctaaagaaaaagaa
ttgaaggacaatatcttgcactggcaaagaatactacaccaagtatctaacatcatttcg
aatgactctcatcctacttcaaaatcctccaatagcaaggattgtatggtatctcgatgt
ttaactacaaaggctgcaatgattctcgaagccaagtatggtcctttcttggagctggaa
gcaattgaaattcctaagagaaaaggtaagaagggaaaaccaagtcatgatgagagaatg
ttcagatgcgagtgcttagaacctgtatggccttctagacaccattgtttgtcttgtcac
caaacattttcaactgaagtggagcttgatggacataatgatggaaggtgtaccccaaat
aatactggatctgatgaaagcaaagaaagcaatgatcaatcaaaagttaagggaataagg
tctgaaaacgttaggggaaaagacaatcatgaggaaattgatgttggcgattcatcagag
aaattttttgaattcaactccagttttgttagactttcaaggacaacatgcccatatgac
tttgacttgatcagcaaaaggttcatagtagaaaactctaacaaggagatagtgcaagaa
attggtcttattgggtccaatggaattccatcctttgttccttcaggtgctttctttttg
aattcaggagaagagctgagccaaagtctgaattctaatgttaatgggagcactgctttg
tctttttcttcaggagtacagttcctactacctagagggaggggtcgaacagggttaaat
ataactgaagatgaagttagaagagggaatggacatgccagcacatctcagaatgctttt
gatagtgttaatgatgaacaatctcagagaatcaaaagatctactcgaggtattggtaat
gagggagaagcatcctccatgaccagtaacactcagcatgctggaattagcagtggatgc
acagttccagaatcatcattgaaacctgtagttgggaagacatctgaaattcttaagcgg
ctcaaggttaacttacttgatatggaagctgcacttccagttgaagcactgagaccttca
aaattaattttgcaaaaaagatgtgcttggcgcacctttgttaaatctttgcagtccata
tttgagatgattcaagcaacaaccctacttgaaggtatggttaaaacggagtacctaaaa
aatgggtggtggtactggtcctctcagacagctgctgcaaggacatcaacggtttcgtcg
cttgctcttcgtatttacactcttgatgattgtctcacctacaccaagaaccaggatcct
ggttcaaataccatagagagtgatccaaagccggcaaataaggcaggaaagaagaggaaa
gatatggagacatga
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integrated database retrieval system
