Zingiber officinale (ginger): 122009239
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Entry
122009239 CDS
T08725
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122009239
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
122009239
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
PAXIP1_C
Motif
Other DBs
NCBI-GeneID:
122009239
NCBI-ProteinID:
XP_042421254
LinkDB
All DBs
Position
8A:61463984..61472211
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AA seq
844 aa
AA seq
DB search
MPILAAVSGSLLSPESLSAAGRDADKISLPSLQSKMKCDPEGYEAELLLLYRHFESSLNL
FHHQSALSTSSDPAVAKDLADLVLFLAHVTPFYMDRLSDFPRKIADLLRTNARSLPASLR
SHLAQALILLVNRKIVDVEEILELFMELQILDDRVLRKLAFSHIVHYIRRMNQKHKNEAN
NRNLQNILFLMLQGEEELKAKRSLVILCDLHRRRVWFDDRTANVICTACFHTSSRVMISS
LSFLLGYERVEVDDDSDASSGEDDTTQEPINLSREAIYKAQNKGTSASKKKKKAKLQRVI
RNMKRHQRLASQNNSSSFYSPLSHLKDAQGFAEKLFSRLQKCNERFEVRMMMLKVIARTV
GMHRLILLNFYPFLQKYVQPHQRDVTELLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDR
SRTEAIAVGLNVVREICIRMPLLMNEDLLQDLVLYKKSHEKAVSAAARSLMTLFREICPS
LLVKKDRGRPVNPKARPKAYGEVSVPSDVPDIELLQHDDNSTASSSDGEASASDVEEDGS
NKEPEGENVSSEDGEEDDDFSDEGNEDEDEEEIDEPEDDDSIGVDENDSDDSDNDDEATQ
YDYDSDARDMEETDMNVDSSKSSVEKMANKNSDEDDDNIDAQSNSDDDNDENKDEINTKS
KKRKFVDYIGQLNASESSLRALKKLAMVKTAQKASDETDGILSNEDFQRIKELKAKKEAK
LAMAQHGILRHSSDSKGSSFKIPSSEKLSMKPVDPAMLEAHIRRKLTKEERLAIVKAGRE
DRGKYQARAAVKQKKTGGMSNRQKEHKKKMPLAAKRAKVARSRQEKKKQDRRTGKQFRGR
KAWK
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgccgattctggccgctgtctccggttctctcttatcgccggagtccctctcggccgcc
gggagggacgccgacaagatcagcctcccgtcgctgcagtcgaagatgaagtgcgacccc
gaggggtacgaggcggagctgctactcctctaccgccacttcgagtcctccctcaatctt
ttccaccaccagtccgccctcagcacctcctcggaccccgccgtcgccaaggaccttgcc
gacttggtcctgttcctcgcccacgtcacccccttttacatggataggctctccgacttc
ccacgtaagatcgcggacctcctccgcaccaacgcacgatcccttccggcgtcactcagg
agtcatctcgcccaggccctgatcctccttgtgaataggaagattgttgacgttgaagaa
attctcgagttatttatggaacttcagattcttgatgatcgagttttaagaaaattggcc
ttttcacatattgtgcactacattcggcgcatgaatcagaaacataaaaatgaagccaat
aaccggaatctgcagaacattctatttttgatgctgcagggtgaggaggaactgaaggct
aaaaggtcccttgtcattctttgtgatcttcatcgaagaagggtttggtttgacgaccgt
actgctaatgtcatttgcactgcatgttttcacacatcttcaagggttatgatatcttct
ctttcgtttcttcttggttatgaacgggttgaagtggacgatgacagtgatgcttcaagc
ggtgaagatgatactactcaagaaccaatcaatcttagccgagaagctatttataaggca
caaaataaaggcacgagtgctagcaagaaaaaaaagaaggcaaagctgcagcgtgtaatc
cgcaacatgaagagacaccaacgactagcatcacagaataatagttccagtttctattca
cctctttcacatttaaaggatgcacagggttttgctgagaaattgttctcccgtcttcag
aaatgcaatgaacgctttgaggttaggatgatgatgttgaaagtaattgccaggactgtt
ggaatgcatcgtttgattttgttgaatttttatccttttctccaaaaatatgttcagcct
catcaacgtgatgtcacagagttgcttgctgctgcagtccaggcctgccacgatatggta
cctcctgatgcagttgagccattattcaaacaaattgttaatcagtttgttcatgatcga
tctcgcactgaggccatcgctgttggactgaatgttgtcagagagatatgtatcagaatg
cctctgttaatgaatgaagatctccttcaagatttggtcttgtacaaaaaatctcatgag
aaggccgtttccgcagcagctcgttccttgatgactttatttagagagatatgcccttca
ttattggtcaaaaaggaccgtggtcggccagtgaatcccaaagctaggcctaaagcttat
ggagaagttagtgtgccttctgatgtgcctgacatcgagctgctgcaacatgatgacaac
tcaacggcttctagctctgatggggaagcttctgcatcagatgtggaggaggatggtagc
aacaaagagccagagggcgagaatgtttcttcagaagatggagaagaagatgatgatttt
tcagatgaaggaaatgaagacgaggatgaggaagaaattgatgagccagaagatgatgat
agcattggtgtggatgaaaatgatagtgatgattctgataatgatgatgaagcaacccag
tacgactatgatagtgatgccagagatatggaagaaactgacatgaatgtggattcctcc
aagtcttcagtggagaagatggctaataagaactctgatgaagatgatgacaacattgat
gctcaaagtaattcagatgatgataatgatgaaaacaaggacgagatcaacaccaaatca
aagaagaggaagtttgtggattatattgggcaacttaatgcttcagaatcaagtcttcgt
gcccttaaaaagctagctatggtcaagacagcacagaaagcatctgatgagactgatgga
attctttctaatgaagattttcagcgcataaaagaattgaaggcaaagaaagaagcaaaa
ctggctatggctcagcatggaattttacgacacagttcagactccaaaggctcttctttt
aaaatcccttcttctgagaaactgagtatgaaacctgtggatcctgctatgcttgaagcc
cacattaggcgaaagcttaccaaggaggagagattggcaatagtaaaggctgggagagag
gatagagggaagtaccaagccagagctgcagtgaaacagaaaaagactggtggcatgagc
aatcggcaaaaggagcacaaaaagaagatgcctcttgctgcgaaacgagcaaaggtggct
cgatccaggcaggaaaagaagaagcaagacaggagaacagggaagcagttccgtggaagg
aaagcctggaagtga
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