Zingiber officinale (ginger): 122009374
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Entry
122009374 CDS
T08725
Name
(RefSeq) protein HASTY 1-like
KO
K14289
exportin-5
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122009374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122009374
03036 Chromosome and associated proteins [BR:
zof03036
]
122009374
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122009374
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
122009374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Motif
Other DBs
NCBI-GeneID:
122009374
NCBI-ProteinID:
XP_042421434
LinkDB
All DBs
Position
8A:complement(67571223..67588001)
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AA seq
1203 aa
AA seq
DB search
MDDCSSTAATVAQAIAAALDWNSPPDSRKAAVAYLESVKSGNVRTLASTSLLLVRSDWTS
EIRLHGFKMLQHLVRYRWDEFNITERREFANLTISIISEVVNHQEEWALKSQTAALVAEV
VRREGVALWHELLPTLVSLSAKGPIEAELVAMVLRWLPEDITVHNEDLEGDRRRVLLRGL
TESLAEILPLLYTLLEKHFGAALREFMAQQLDAAKQHATAVIASLNAVNAYTEWAPVPDL
AKYGLIHGCGCILPYNEFRLHACEFFKFLSQRKRPTDNTAVEFDSAMMSVFQILMNISRD
FFNKSKSNFSAIDETEIEFMESICECMVTLASSNVQCITGDGAMTSQFLQQMLEYYQHVK
FALHYQSLLFWLVIMREPVSKGKSSGHSLGENFVGNLGIASKPSEKEKIIMSVLVNDDIC
AAILDISFLRMLKKNPSAGNLSTQNDFELWDDEFDSKTDFSQYRSRLLELIKLIAVQKPL
LAATRVSERITMIFKNCAHASVSAQELAMLESAQMGLETVAGAIFDGPVEFVNIVAESKL
QLHSTFEGLLQHFLSLRWTEPALAVILCRYLDSLGPYFKYYSDTIASVVNRLFELLTSLP
IAIKDPSLNNTRHARLQICTSFIRIAKAAGRSLLPHMKGIADTMAYLQGEGRLLRGEHNI
LGEAFLVMAASSGIQQHQEVLAWLLEPLSKQWTQSEWQNAFLSDPAGLTRLFSDPQFMWS
IYHNVTFFEKALKRSGVKKPAMNLQGSSEATDASTHPYAMSSHLSWMLPPLLRLLRCIHS
LWSPPISEALPAEIRAAKAMSHAEKASLLGESTKLLKDLSTSGDGRQADTIREEELSEND
LRNWLKGIRDSGYNVVGLSTTVGDTFFKCLESHSVALALTDNVQSMEFRHLRLLIHSVII
PLVKFCPPNLWELWLENILHPLLIHCQQTLACSWSSLLCEGRVKVPDCFGNLSGLELKVE
VMEEKLLRDLTREVCSLLSTLASPPLNTGLPSLEQLGPGNRVDSLKDLNAFASNSLVAFL
MTRQGLALHSLRIGINALAWTDGDSVNKVIPFCGLIIVLAIITSSVELREIVSKDLFLAL
IQALSLESNAMISSDLLGLCREIYVYLADRDPAPRQVMLSLPSITSNDLLAFDDALIKTS
SPKEQKQLLKGLLLSATGNKLRALAALRTTNIITNVTARARSSASNSGHNTEEDGTIGLA
AIT
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacgactgcagcagcacggccgccaccgtcgcccaagccatcgccgccgcactggat
tggaactctccccccgattcccgcaaggccgctgtcgcctacttggaatccgtcaagagt
gggaatgttcgaactttggctagcacatctcttctcctagttcgaagtgattggacctct
gagattcgactacatgggtttaagatgttgcagcatttggttcgatatagatgggatgag
ttcaacattacagaaaggagagagtttgcaaaccttacaattagtataatctcagaggtg
gtgaaccatcaggaggaatgggcattgaagagtcaaacagctgctttagttgctgaggtt
gtgcgacgagaaggagtagcactttggcatgaacttctaccaactctggtttctctatca
gccaaaggtcccattgaggctgagttagttgccatggtgctgaggtggcttcctgaagac
atcacagttcataatgaagacctagaaggtgacaggagaagagtattgttgcgtgggctt
actgaatcattggctgaaattttaccactattatacactttgcttgagaaacattttgga
gctgctttgagagagttcatggcacaacaattagatgctgcaaaacaacacgcaactgcc
gtaatagcttctctgaatgctgtaaatgcgtatactgaatgggctcctgtgcctgatctt
gcaaaatatggtttgatccatgggtgtggatgcatattgccttataatgaatttcgcctc
catgcttgtgagttttttaaattcctttctcaaaggaaaaggcccactgataatacagct
gtggagtttgattctgcaatgatgtctgtcttccaaattttaatgaacatttcaagagat
tttttcaataaatctaagtcaaactttagtgcaattgatgaaactgagattgagtttatg
gaatctatatgtgagtgtatggtaactttagcttcttccaatgtgcaatgtattactggt
gatggagcaatgacttctcaatttcttcaacagatgctggagtattaccaacatgtaaag
tttgccctccattatcaatccttgctcttttggctcgtaataatgagagaacctgtttca
aaggggaaaagttctggacatagtttgggtgaaaattttgttggcaatttgggaattgcc
tccaaaccctccgagaaagagaagattatcatgtcagtccttgtcaatgatgacatttgt
gcagctatcttggatatttctttcctgagaatgttgaagaaaaatccatctgcaggcaat
ctatctactcagaatgactttgaactatgggatgatgagtttgattcaaaaactgacttc
agtcagtatcgctctaggctgctggagcttattaaacttattgctgttcaaaagccattg
cttgctgcaacaagagtttcagagagaattactatgatttttaaaaattgtgctcatgct
tctgtgtcagctcaggaattagcaatgctagagagtgctcaaatgggacttgaaacagtt
gccggtgcaatttttgatggcccagttgaatttgtgaatattgttgctgagtccaagttg
caattacacagtacttttgaaggtcttcttcaacatttcctttccttaagatggactgaa
ccagcacttgcagtaattctctgtagatacttggattcgttgggaccttatttcaaatat
tattccgacacaattgctagtgttgttaataggctttttgagctgttaacatcacttcct
attgcaatcaaggatccttctttaaataatactcgacatgctagactgcaaatttgtaca
tcatttatccgcatcgccaaagctgctgggagaagtcttcttcctcatatgaagggcatt
gctgacaccatggcctatcttcaaggagaaggtcggttgctgcggggtgagcataatatt
ttaggcgaagcatttcttgttatggcagcttcttctgggattcaacaacatcaggaagta
ttagcctggttgcttgaacctttgagcaagcaatggacccagtcagagtggcaaaatgca
tttttatctgatccagctggtctaacccgattgttctctgatcctcaatttatgtggtca
atttaccataacgtgaccttttttgagaaggcactcaaaagaagtggagttaagaagcct
gccatgaatctacagggaagttcagaagccactgatgcatctactcatccatatgctatg
tcttctcatttgtcatggatgctgcctcctctcttgaggttgttacgatgcatacattct
ctatggtctccaccaataagtgaagctttgccagcagaaattagagcagcaaaggctatg
agtcatgctgagaaggctagccttcttggtgaaagcactaaattgctaaaagatctgtct
acttcaggagatggacgccaggctgacacaataagagaagaagagttaagtgaaaatgac
ttaagaaattggctaaagggaatcagggacagtggctacaatgtagtaggactttcgaca
accgttggcgacacattctttaaatgcttggagagtcattctgttgcattagctctaaca
gataatgtacaatcaatggagtttagacatctacgactacttatccactcagtcatcatt
cctttggtgaaattctgtcctccaaacttatgggagctttggctagaaaatatcttacac
cctttactgatccactgccagcaaacccttgcttgttcatggtccagtcttttatgcgaa
ggtagggtaaaggttcctgattgctttggcaatctttctggtctggagctgaaggtggaa
gtgatggaggaaaagttgctccgtgacttgactcgagaagtgtgttcacttctctcgact
ttggcttcaccacctctgaacactgggcttccttctttagagcagcttggacctggtaat
cgtgttgattcacttaaagatttgaatgcctttgcctcaaattctttggtcgccttcctc
atgactcgccaaggtctcgctcttcactcattgagaataggcataaacgcattggcatgg
accgatggggattctgtgaataaagttatccctttctgtgggttgattattgttcttgct
attataacaagcagtgtggaacttagagagattgtctccaaggatttgttccttgcttta
attcaagctttatcacttgagtccaatgccatgattagctcggacctccttggattgtgt
cgtgaaatatatgtatatctggcagatagagatcctgcaccacgccaggttatgttgagc
ctcccttctatcacaagcaatgatttgcttgcttttgatgatgctctgatcaaaactagt
agccctaaagaacaaaagcaactccttaagggcttgcttctatcagctactggaaataaa
ttgagagctcttgctgccctaaggaccacaaacatcataacaaacgttacagctagagca
aggagttcagcttcaaactctggacacaacactgaggaagatggcaccattggcttggca
gcaataacttga
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integrated database retrieval system
