Zingiber officinale (ginger): 122009385
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Entry
122009385 CDS
T08725
Name
(RefSeq) small RNA 2'-O-methyltransferase-like isoform X1
KO
K20798
small RNA 2'-O-methyltransferase [EC:
2.1.1.386
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zof03036
]
122009385
Enzymes [BR:
zof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.386 small RNA 2'-O-methyltransferase
122009385
Chromosome and associated proteins [BR:
zof03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122009385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hen1_Lam_C
dsRBD2
Hen1_LCD
Methyltransf_12
Methyltransf_23
DSRM_2
Methyltransf_11
Methyltransf_31
Methyltransf_25
Methyltransf_33
Methyltransf_32
dsrm
dsrm_Ferlin
Ubie_methyltran
MTS
AviRa
SufBD_N
Motif
Other DBs
NCBI-GeneID:
122009385
NCBI-ProteinID:
XP_042421446
LinkDB
All DBs
Position
8A:complement(68501976..68514580)
Genome browser
AA seq
992 aa
AA seq
DB search
MRKRWGDPFNTASITNKSISGKHFPCFEIFEIGANPSVSVEEFPQPSETVIMEYPEQPGL
SIKRPVITPKAVIHQKFGSSANYRIEEVKEDVENGCPGLTIPQQAKILYRCHLDLPGLSV
TSEPFSRKKDAEQSAARIAVEKQLHIQPSTSDSTPEEASKELVERISGFFTDGFLSSSHP
LIGHFGVALKANREHFGMIPISAIASCDVKVNNLCKIIICKAESDPLLVSSLIFNAARKS
SELCTADDGLWIWKKVPYSPETIASVNSCDSDSLGFTKIQSLHIPCSIEENVEPLTLDVS
DDNYYLDLIAQKLNVRDSSQILVSRTVGKASSELKLYFPLPHVPYCEASSYLYRRTRGNV
ELMLNQRASYLSGQYIYGNAILANIGYSWKTTSLYHENVSICSYYRMLLAKVPDGYYKLS
REAILVSELPTEYTGRSNWRGPTPKDLLSAFCHQHRLLEPVFSVTSNDTESSVSHTLVTS
SPLSSTEVIDKIGGDRLDVGHRNLDNSDIFRCKVKILSRKMQLILEGSFADTNRKESDVI
HSSALRVLLWFDKYFKQLDIPVETLSSFGSAHGITVSVENVRKEFSLYLSTLGLKQNYCL
ENSSLESFCKNHPDRKLENGMVMLSIDGLESGIFPLHGSLICIGCAVALVKIGDPEKYYL
ESKDEFEFEVGTGAVIYQIEACVTQLSVNQTAQFVTDIPSRDVILVAAGETAKHLLEMPL
HNCLLEYTLKVLRVAEPLEDRMEQAFFNPSLSKQRVMFAVKHINESSAATLVDFGCGSGS
LLDSLLDHATSLEKIVGVDISRKGLTRAAKIIHQKLSQISGMSSIKHAVLYYGSITVPDS
HVFGFDIGTCLEVIEHMDEDQASLFGNIALGTFCPRILIVSTPNYEYNPILQRSAAPTME
EKTTPCKFRNHDHRFEWTREQFEHWAIDLSARHNYHVEFSGVGGLADVEPGFASQIAVFR
RNSNLCLPAEEKPKMEEDLPRPYELIWEWSNS
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaagatggggggatccatttaacactgcatctatcacaaataaatcaatctca
gggaagcattttccatgtttcgagatatttgagatcggggcaaatccttcggtttccgtt
gaagagtttcctcaaccatcagagacagttattatggaatatccagaacaaccagggctt
tccataaaacgaccagtaattacacctaaggctgtgattcatcagaaatttggtagttct
gcaaattataggattgaggaagtaaaggaagatgttgagaatggttgccctggattgacc
attccacagcaggcaaagattttatatcggtgtcatctggatctaccaggtctctctgtt
acttctgaaccattcagtagaaagaaagatgctgagcagtctgctgcaagaattgctgtt
gaaaaacagctgcatattcagccttcaacaagtgattccactccagaggaagcatcaaaa
gaattagttgaacgtatctctggctttttcactgatgggttcctttcatcatctcatcca
ttaattgggcattttggtgtcgcacttaaagcaaatagagaacattttggtatgattccc
atatctgccattgcctcatgtgatgtgaaggttaataacctttgcaaaatcattatctgt
aaagcagaatcagatcctcttttggtttcatcacttattttcaatgctgccagaaaatca
tctgaattgtgtactgctgatgatggactatggatttggaagaaagttccatattctcct
gagactatagcatctgtaaatagttgtgattcagattctcttgggtttacaaaaatacaa
tcactacatattccctgctccatcgaggaaaatgttgaaccacttactcttgatgtctct
gatgataattactaccttgatttaattgctcagaagttgaatgttagggattcttctcaa
attcttgtctcaaggacagttggcaaggcttcttctgagctgaagttatacttccctttg
ccacacgttccttactgtgaggcctcatcatatctatatagacgcacaagaggaaatgtt
gagttgatgctaaatcaaagggcttcatatctctcagggcaatatatttatggaaatgcc
atcttagctaatattggatactcatggaagaccaccagtctataccatgaaaatgtctct
atctgttcttattatagaatgcttcttgctaaggtccctgatgggtattacaagttatcc
agagaggcaattcttgtatctgagttacccactgaatacactgggcgttcaaattggagg
ggtcctaccccaaaagatcttctcagtgcattttgtcatcaacataggttactggagcct
gttttctctgttacaagtaatgacacagaatcttctgtatcacatactctagtgacatct
agtccactgagctcaactgaagtaattgataaaataggaggagatcgacttgatgttggc
cacaggaacctggataattctgatattttcagatgcaaagtaaagatcctgtcgagaaaa
atgcaattaatacttgagggttcttttgctgatactaacaggaaagaatctgatgtcatt
cactcttctgcactaagagttcttctttggtttgataagtattttaaacaattagatatt
cctgttgagacattatcctcttttggatctgctcatggtattactgtgagtgtggaaaat
gtccgcaaggaattttctttgtatctatctaccttaggactgaagcagaattactgcctt
gaaaatagttcactggagtcattctgcaagaatcatcctgacagaaaactggagaatgga
atggttatgttaagtattgatggtctagagtctggtatattcccattacatggatctttg
atttgtattggttgtgccgttgcactggtgaagataggagatcctgaaaaatattattta
gaaagtaaagatgagtttgagtttgaggtagggactggtgctgtaatttaccagattgaa
gcatgtgttactcagttgtctgtcaaccaaactgcacaatttgttacagacattccttct
agagatgttatattggttgcagcaggcgagactgctaaacatctattagaaatgcctctt
cacaactgcttgttggagtacacgctgaaggttttacgggtagctgaaccattggaagac
agaatggaacaagcgtttttcaatccttctctttcgaagcagcgggttatgtttgcagtt
aagcacattaacgagtcgagtgctgccactttggtggattttggatgcggatctggtagc
cttcttgattctttgttggatcatgcaacgtctttagagaagattgttggcgtggatatc
tctcgaaagggcctaacacgcgctgcaaagattattcaccaaaagctaagtcaaatttca
ggcatgtcaagcatcaaacatgctgttctttattatggatcaatcacagttcccgactcc
catgtttttggatttgatattggcacttgcttagaggtaattgagcatatggatgaagat
caagcatctctgtttggcaatatcgcattaggcactttctgtcctagaatactgatcgtt
tcgacacccaactacgaatacaatcccattctgcagaggtcagctgcaccaactatggaa
gagaaaacaacaccatgcaagttccgcaaccacgaccacaggttcgagtggacgagggag
cagttcgagcactgggccattgacctttcggccaggcataactaccatgttgaattcagt
ggggtgggtggattagccgacgtggagcctggttttgcttcccaaattgctgttttcaga
agaaactcaaacttatgtcttccagcagaagagaagccaaagatggaggaggatttaccc
cgaccttacgaactcatatgggaatggtccaactcttag
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